RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 VAT1LQ9HCJ6 419 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 DIS3Q9Y2L1 958 aaKnown RBP9.69□□□□□ -0.86
PSEN1-209ENST00000553855 MYH4Q9Y623 1939 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 SLC12A7Q9Y666 1083 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 B4DLN1 442 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 KLRF2D3W0D1 207 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 MSCO60682 206 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 DDAH1O94760 285 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 LIFRP42702 1097 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 MRPL12P52815 198 aaKnown RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 SNAP25P60880 206 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 FUT2Q10981 343 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 BLOC1S2Q6QNY1 142 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 NSMFQ6X4W1 530 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 MSL3Q8N5Y2 521 aaKnown RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 NPLOC4Q8TAT6 608 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 DEFB118Q96PH6 123 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 LZTS2Q9BRK4 669 aa9.68□□□□□ -0.86
PSEN1-209ENST00000553855 ADD3Q9UEY8 706 aaKnown RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 NAP1L2Q9ULW6 460 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-209ENST00000553855 ABCB11O95342 1321 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 PTPDC1A2A3K4 754 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 ASB14A6NK59 587 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-209ENST00000553855 SH2B2O14492 632 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-209ENST00000553855 COBLO75128 1261 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 SGPL1O95470 568 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 PGK2P07205 417 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 CFHP08603 1231 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 CYP2C19P33261 490 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 HSPA4P34932 840 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 GJA8P48165 433 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 RGS19P49795 217 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 CACNB2Q08289 660 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-209ENST00000553855 GRM4Q14833 912 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 CCL14Q16627 93 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 USH1GQ495M9 461 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 RASGRP2Q7LDG7 609 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 FBXO11Q86XK2 927 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 MCF2L2Q86YR7 1114 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 ADGRF4Q8IZF3 695 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 ZNF654Q8IZM8 581 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 IGDCC4Q8TDY8 1250 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 MAML3Q96JK9 1138 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 JAKMIP1Q96N16 626 aaKnown RBP9.67□□□□□ -0.86
PSEN1-209ENST00000553855 MAP3K14Q99558 947 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 SEC63Q9UGP8 760 aaKnown RBP9.67□□□□□ -0.86
PSEN1-209ENST00000553855 NRBP1Q9UHY1 535 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 MRPL11Q9Y3B7 192 aaKnown RBP9.67□□□□□ -0.86
PSEN1-209ENST00000553855 RIPK3Q9Y572 518 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 TAF6LQ9Y6J9 622 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 MGAMO43451 1857 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 ZSWIM8A7E2V4 1837 aa9.67□□□□□ -0.86
PSEN1-209ENST00000553855 A0A0G2JMZ2 1700 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 EN2P19622 333 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-209ENST00000553855 ANTXR2P58335 489 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 PDE4CQ08493 712 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 ZNF792Q3KQV3 632 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 RNF207Q6ZRF8 634 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 HOMER1Q86YM7 354 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
PSEN1-209ENST00000553855 TINF2Q9BSI4 451 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 AMNQ9BXJ7 453 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 LY9Q9HBG7 655 aa9.66□□□□□ -0.86
PSEN1-209ENST00000553855 ZNF536O15090 1300 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 SYNGAP1Q96PV0 1343 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 CCDC196A0A1B0GTZ2 297 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 ZBTB5O15062 677 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 FARP2O94887 1054 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 CALML3P27482 149 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 TROAPQ12815 778 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 TRIM32Q13049 653 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 MICU3Q86XE3 530 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 RRP36Q96EU6 259 aaKnown RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 HTATIP2Q9BUP3 242 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 LRRC2Q9BYS8 371 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 MAF1Q9H063 256 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 SPC25Q9HBM1 224 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 A1CFQ9NQ94 594 aaKnown RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 PAK6Q9NQU5 681 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 RBM28Q9NW13 759 aaKnown RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 FLRT1Q9NZU1 646 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 DDX20Q9UHI6 824 aaKnown RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 MAD2L2Q9UI95 211 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 ZHX1Q9UKY1 873 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-209ENST00000553855 SNX14Q9Y5W7 946 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms