RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 EIF3JO75822 258 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 BAG3O95817 575 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 SYF2O95926 243 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 IDEP14735 1019 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 TNNT3P45378 269 aaPredicted RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 VAV2P52735 878 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 RHBDL3P58872 404 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 KRT83P78385 493 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 ZNF662Q6ZS27 426 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 REXO1Q8N1G1 1221 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 LRRC47Q8N1G4 583 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 MSL3Q8N5Y2 521 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 NEDD1Q8NHV4 660 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 C6orf50Q9HD87 102 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 HPCAL4Q9UM19 191 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 LTBP1Q14766 1721 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 MOCS3O95396 460 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 EIF6P56537 245 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 GPS2Q13227 327 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 LRRC41Q15345 812 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 ECM1Q16610 540 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 TSR1Q2NL82 804 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 CENPPQ6IPU0 288 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 LRRC55Q6ZSA7 311 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 C2CD5Q86YS7 1000 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 AMOTL1Q8IY63 956 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 CAGE1Q8TC20 777 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 COG1Q8WTW3 980 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 RRP36Q96EU6 259 aaKnown RBP7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 MTMR9Q96QG7 549 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 UIMC1Q96RL1 719 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 PSMB7Q99436 277 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 LZTS2Q9BRK4 669 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 FGFBP2Q9BYJ0 223 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 GBP3Q9H0R5 595 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 SALL4Q9UJQ4 1053 aa7.72□□□□□ -1.17
LINC-ROR-201ENST00000553704 EP400Q96L91 3159 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 A0A1W2PQJ5 194 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 LRRC53A6NM62 1247 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 RGL2O15211 777 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 NCK2O43639 380 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 RNF40O75150 1001 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 UFL1O94874 794 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 PRPF6O94906 941 aaKnown RBP7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 PDHBP11177 359 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 KIF11P52732 1056 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 GSTO1P78417 241 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 CALCRLQ16602 461 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 UBE2SQ16763 222 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 CCDC96Q2M329 555 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 VWA3BQ502W6 1294 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 FIGNQ5HY92 759 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 CNNM4Q6P4Q7 775 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 ZNF804AQ7Z570 1209 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 FAM114A1Q8IWE2 563 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 CCDC170Q8IYT3 715 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 RETREG2Q8NC44 543 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 FAM71BQ8TC56 605 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 HDAC7Q8WUI4 952 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 SECISBP2LQ93073 1101 aaKnown RBP7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 NUP58Q9BVL2 599 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 SH2D4AQ9H788 454 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 FAM204AQ9H8W3 233 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 ZNHIT6Q9NWK9 470 aaKnown RBP7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 SEC63Q9UGP8 760 aaKnown RBP7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 LEMD3Q9Y2U8 911 aa7.71□□□□□ -1.17
LINC-ROR-201ENST00000553704 GPR75-ASB3A0A0A6YYF3 556 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 PPP1R11O60927 126 aaPredicted RBP7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 SLURP2P0DP57 97 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 GNA11P29992 359 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 ACTN2P35609 894 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 EIF4A3P38919 411 aaKnown RBP7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 TUBB4BP68371 445 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 APBA1Q02410 837 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 COBLL1Q53SF7 1204 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 RC3H1Q5TC82 1133 aaKnown RBP7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 SOGA3Q5TF21 947 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 NFRKBQ6P4R8 1299 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 TMC4Q7Z404 712 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 CREG2Q8IUH2 290 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 GOLGA5Q8TBA6 731 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 BAP1Q92560 729 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 LARP4BQ92615 738 aaKnown RBP7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 NDST4Q9H3R1 872 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 PLEKHA4Q9H4M7 779 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 CD209Q9NNX6 404 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 JADE2Q9NQC1 790 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 PLAGL2Q9UPG8 496 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 MYH4Q9Y623 1939 aa7.71□□□□□ -1.18
LINC-ROR-201ENST00000553704 ANO9A1A5B4 782 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 AKR1B1P15121 316 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CXCR5P32302 372 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CDK17Q00537 523 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CKAP4Q07065 602 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 KIF5AQ12840 1032 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 FKBP15Q5T1M5 1219 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 UNC13DQ70J99 1090 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms