RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NLRP5P59047 1200 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 MAP3K21Q5TCX8 1036 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 FAM177A1Q8N128 213 aaPredicted RBP15.89■□□□□ 0.13
TUBB3-202ENST00000553656 BICD2Q8TD16 824 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 IWS1Q96ST2 819 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.89■□□□□ 0.138e-7■■■■□ 24.2
TUBB3-202ENST00000553656 UNC93B1Q9H1C4 597 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 PXMP2Q9NR77 195 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 ASTN1O14525 1302 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 MEIS2O14770 477 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 JAK2O60674 1132 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 CYBAP13498 195 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 HMGN5P82970 282 aaKnown RBP15.88■□□□□ 0.13
TUBB3-202ENST00000553656 ST3GAL1Q11201 340 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 TRIM29Q14134 588 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 MTFR1Q15390 333 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 UBE2SQ16763 222 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 FAM184AQ8NB25 1140 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 ALG1Q9BT22 464 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 ZMYND12Q9H0C1 365 aa15.88■□□□□ 0.13
TUBB3-202ENST00000553656 MSCO60682 206 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-202ENST00000553656 FOSP01100 380 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-202ENST00000553656 IGHA2P01877 340 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 CCND3P30281 292 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-202ENST00000553656 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 STXBP2Q15833 593 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 PRAMEF19Q5SWL8 479 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 MCTP2Q6DN12 878 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 REXO1Q8N1G1 1221 aaKnown RBP15.87■□□□□ 0.13
TUBB3-202ENST00000553656 VTA1Q9NP79 307 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 LCTP09848 1927 aa15.87■□□□□ 0.13
TUBB3-202ENST00000553656 NR3C2P08235 984 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 MYCLP12524 364 aaPredicted RBP15.86■□□□□ 0.13
TUBB3-202ENST00000553656 AKR1A1P14550 325 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 EDNRBP24530 442 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 CCND2P30279 289 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 AP3B2Q13367 1082 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 GALNT17Q6IS24 598 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 HSCBQ8IWL3 235 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
TUBB3-202ENST00000553656 MORC4Q8TE76 937 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 AIFM3Q96NN9 605 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 DEFB118Q96PH6 123 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 PDCD2LQ9BRP1 358 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 FAM184BQ9ULE4 1060 aa15.86■□□□□ 0.13
TUBB3-202ENST00000553656 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
TUBB3-202ENST00000553656 SEPT4O43236 478 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 DTNBO60941 627 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 GJB1P08034 283 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
TUBB3-202ENST00000553656 PGM5Q15124 567 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 TRPV1Q8NER1 839 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 BRMS1Q9HCU9 246 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 PAK6Q9NQU5 681 aaPredicted RBP15.85■□□□□ 0.13
TUBB3-202ENST00000553656 DDX20Q9UHI6 824 aaKnown RBP15.85■□□□□ 0.13
TUBB3-202ENST00000553656 PCDHA6Q9UN73 950 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 PCDHA4Q9UN74 947 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 PCDHA8Q9Y5H6 950 aa15.85■□□□□ 0.13
TUBB3-202ENST00000553656 K7ELQ4 463 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-202ENST00000553656 EIF3JO75822 258 aaKnown RBP15.84■□□□□ 0.13
TUBB3-202ENST00000553656 RARBP10826 455 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
TUBB3-202ENST00000553656 FOSBP53539 338 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 JAKMIP3Q5VZ66 844 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 XRRA1Q6P2D8 792 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 SNX21Q969T3 373 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 ANO3Q9BYT9 981 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 DDX49Q9Y6V7 483 aaKnown RBP15.84■□□□□ 0.13
TUBB3-202ENST00000553656 FRMPD4Q14CM0 1322 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 MCM3APO60318 1980 aa15.84■□□□□ 0.13
TUBB3-202ENST00000553656 STAM2O75886 525 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 TFRCP02786 760 aaKnown RBP15.83■□□□□ 0.12
TUBB3-202ENST00000553656 CCDC144BQ3MJ40 725 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 GNPTABQ3T906 1256 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 PCNX4Q63HM2 1172 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 BLIDQ8IZY5 108 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 SCFD2Q8WU76 684 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 C8orf76Q96K31 380 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 TMEM260Q9NX78 707 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 KCNJ14Q9UNX9 436 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
TUBB3-202ENST00000553656 LRRC37A2A6NM11 1700 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 CAPN2P17655 700 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 ADCYAP1R1P41586 468 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 GJA8P48165 433 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
TUBB3-202ENST00000553656 TNFAIP2Q03169 654 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 SAFBQ15424 915 aaKnown RBP eCLIP15.82■□□□□ 0.12
TUBB3-202ENST00000553656 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 IQSEC1Q6DN90 963 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 SEPT14Q6ZU15 432 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 VSIG10LQ86VR7 867 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 DAGLBQ8NCG7 672 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms