RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ADCYAP1R1P41586 468 aa26.28■■□□□ 1.8
TDP1-206ENST00000553569 NAPAP54920 295 aa26.28■■□□□ 1.8
TDP1-206ENST00000553569 NTRK3Q16288 839 aa26.28■■□□□ 1.8
TDP1-206ENST00000553569 UBE2Q1Q7Z7E8 422 aa26.28■■□□□ 1.8
TDP1-206ENST00000553569 SMARCC2Q8TAQ2 1214 aa26.28■■□□□ 1.8
TDP1-206ENST00000553569 PAWRQ96IZ0 340 aaKnown RBP26.28■■□□□ 1.8
TDP1-206ENST00000553569 SLC26A6Q9BXS9 759 aa26.28■■□□□ 1.8
TDP1-206ENST00000553569 CPLX1O14810 134 aa26.27■■□□□ 1.8
TDP1-206ENST00000553569 PGK1P00558 417 aa26.27■■□□□ 1.8
TDP1-206ENST00000553569 MNX1P50219 401 aaPredicted RBP26.27■■□□□ 1.8
TDP1-206ENST00000553569 AKAP17AQ02040 695 aaKnown RBP26.27■■□□□ 1.8
TDP1-206ENST00000553569 GJC2Q5T442 439 aaPredicted RBP26.27■■□□□ 1.8
TDP1-206ENST00000553569 USP17L6PQ6QN14 398 aa26.27■■□□□ 1.8
TDP1-206ENST00000553569 SLKQ9H2G2 1235 aaPredicted RBP26.27■■□□□ 1.8
TDP1-206ENST00000553569 PSTPIP2Q9H939 334 aa26.27■■□□□ 1.8
TDP1-206ENST00000553569 STXBP3O00186 592 aa26.26■■□□□ 1.79
TDP1-206ENST00000553569 SCG2P13521 617 aa26.26■■□□□ 1.79
TDP1-206ENST00000553569 IFNAR1P17181 557 aa26.26■■□□□ 1.79
TDP1-206ENST00000553569 RBM25P49756 843 aaKnown RBP26.26■■□□□ 1.79
TDP1-206ENST00000553569 TNFAIP2Q03169 654 aa26.26■■□□□ 1.79
TDP1-206ENST00000553569 PFKFB3Q16875 520 aaPredicted RBP26.26■■□□□ 1.79
TDP1-206ENST00000553569 TYW1BQ6NUM6 668 aa26.26■■□□□ 1.79
TDP1-206ENST00000553569 TAPT1Q6NXT6 567 aa26.26■■□□□ 1.79
TDP1-206ENST00000553569 SYNRGQ9UMZ2 1314 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 hCG_1984214I3L0E3 225 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 PRPF3O43395 683 aaKnown RBP26.25■■□□□ 1.79
TDP1-206ENST00000553569 SCRN1Q12765 414 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 UBE2SQ16763 222 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 PPP1R18Q6NYC8 613 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 NECAB2Q7Z6G3 386 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 ZNF713Q8N859 430 aaPredicted RBP26.25■■□□□ 1.79
TDP1-206ENST00000553569 ARRDC4Q8NCT1 418 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 IWS1Q96ST2 819 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 KIF2CQ99661 725 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 RNF26Q9BY78 433 aaPredicted RBP26.25■■□□□ 1.79
TDP1-206ENST00000553569 BARHL2Q9NY43 387 aa26.25■■□□□ 1.79
TDP1-206ENST00000553569 RBM27Q9P2N5 1060 aaKnown RBP26.25■■□□□ 1.79
TDP1-206ENST00000553569 KBTBD13C9JR72 458 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 DNM1LO00429 736 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 MEIS2O14770 477 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 DUSP11O75319 330 aaKnown RBP26.24■■□□□ 1.79
TDP1-206ENST00000553569 NR3C2P08235 984 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 MYCLP12524 364 aaPredicted RBP26.24■■□□□ 1.79
TDP1-206ENST00000553569 PTGS1P23219 599 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 LRRC41Q15345 812 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 CPLX2Q6PUV4 134 aaKnown RBP26.24■■□□□ 1.79
TDP1-206ENST00000553569 IL31RAQ8NI17 732 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 PDCD2LQ9BRP1 358 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 C11orf49Q9H6J7 331 aa26.24■■□□□ 1.79
TDP1-206ENST00000553569 PIK3CDO00329 1044 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 PFKFB2O60825 505 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 LARGE1O95461 756 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 SMPD1P17405 629 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 SSRP1Q08945 709 aaKnown RBP26.23■■□□□ 1.79
TDP1-206ENST00000553569 PGM5Q15124 567 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 STXBP2Q15833 593 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 PKN1Q16512 942 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 TRIM22Q8IYM9 498 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 KIAA1217Q5T5P2 1943 aa26.23■■□□□ 1.79
TDP1-206ENST00000553569 ADCY7P51828 1080 aa26.22■■□□□ 1.79
TDP1-206ENST00000553569 TMEM63BQ5T3F8 832 aa26.22■■□□□ 1.79
TDP1-206ENST00000553569 IQSEC1Q6DN90 963 aa26.22■■□□□ 1.79
TDP1-206ENST00000553569 SEPT14Q6ZU15 432 aa26.22■■□□□ 1.79
TDP1-206ENST00000553569 RNF180Q86T96 592 aa26.22■■□□□ 1.79
TDP1-206ENST00000553569 WDR11Q9BZH6 1224 aa26.22■■□□□ 1.79
TDP1-206ENST00000553569 MYADML2A6NDP7 307 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 SMCO2A6NFE2 343 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 ADAMTS4O75173 837 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 C6orf222P0C671 652 aaPredicted RBP26.21■■□□□ 1.79
TDP1-206ENST00000553569 CCND2P30279 289 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 IRX5P78411 483 aaPredicted RBP26.21■■□□□ 1.79
TDP1-206ENST00000553569 ME3Q16798 604 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 TLK2Q86UE8 772 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 NECAB1Q8N987 351 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 SCFD2Q8WU76 684 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 SPC25Q9HBM1 224 aa26.21■■□□□ 1.79
TDP1-206ENST00000553569 GNEQ9Y223 722 aaKnown RBP26.21■■□□□ 1.79
TDP1-206ENST00000553569 FRMPD4Q14CM0 1322 aa26.2■■□□□ 1.79
TDP1-206ENST00000553569 ZFP91Q96JP5 570 aaPredicted RBP26.2■■□□□ 1.78
TDP1-206ENST00000553569 UPF3AQ9H1J1 476 aaKnown RBP26.2■■□□□ 1.78
TDP1-206ENST00000553569 RIC8AQ9NPQ8 531 aa26.2■■□□□ 1.78
TDP1-206ENST00000553569 MKI67P46013 3256 aaKnown RBP26.2■■□□□ 1.78
TDP1-206ENST00000553569 RBM47A0AV96 593 aaKnown RBP26.19■■□□□ 1.78
TDP1-206ENST00000553569 DTNBO60941 627 aa26.19■■□□□ 1.78
TDP1-206ENST00000553569 CDKL5O76039 1030 aa26.19■■□□□ 1.78
TDP1-206ENST00000553569 HTATIP2Q9BUP3 242 aa26.19■■□□□ 1.78
TDP1-206ENST00000553569 SENP6Q9GZR1 1112 aaPredicted RBP26.19■■□□□ 1.78
TDP1-206ENST00000553569 AP5M1Q9H0R1 490 aa26.19■■□□□ 1.78
TDP1-206ENST00000553569 ALPK3Q96L96 1907 aa26.19■■□□□ 1.78
TDP1-206ENST00000553569 SPDYE3A6NKU9 549 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 DYNC1LI2O43237 492 aaPredicted RBP26.18■■□□□ 1.78
TDP1-206ENST00000553569 EIF3JO75822 258 aaKnown RBP26.18■■□□□ 1.78
TDP1-206ENST00000553569 ARIH2O95376 493 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 COL6A1P12109 1028 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 GJA9P57773 515 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 TTLL4Q14679 1199 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 RABEP1Q15276 862 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 DUSP28Q4G0W2 176 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 CCDC12Q8WUD4 166 aaPredicted RBP26.18■■□□□ 1.78
TDP1-206ENST00000553569 GTF3C6Q969F1 213 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms