RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 BTNL9Q6UXG8 535 aa12.45□□□□□ -0.42
RNF41-211ENST00000552656 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
RNF41-211ENST00000552656 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNF41-211ENST00000552656 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
RNF41-211ENST00000552656 PTPDC1A2A3K4 754 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 GPR37L1O60883 481 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 CALML3P27482 149 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
RNF41-211ENST00000552656 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 SYDE2Q5VT97 1194 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 GDF6Q6KF10 455 aaPredicted RBP12.44□□□□□ -0.42
RNF41-211ENST00000552656 DCAF4Q8WV16 495 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 NACAP1Q9BZK3 213 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
RNF41-211ENST00000552656 ADD3Q9UEY8 706 aaKnown RBP12.44□□□□□ -0.42
RNF41-211ENST00000552656 C5orf42Q9H799 3197 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 MYH7BA7E2Y1 1941 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 PI4K2BG5E9Z4 385 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 NBNO60934 754 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 RPS6P62753 249 aaKnown RBP12.43□□□□□ -0.42
RNF41-211ENST00000552656 PPP2R5BQ15173 497 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 MIER1Q8N108 512 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 KAT2BQ92831 832 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 TMEM47Q9BQJ4 181 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 SUGCTQ9HAC7 445 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
RNF41-211ENST00000552656 HCN4Q9Y3Q4 1203 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 MUC6Q6W4X9 2439 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 ATG2AQ2TAZ0 1938 aa12.43□□□□□ -0.42
RNF41-211ENST00000552656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 LOC102724159A0A0B4J2E5 919 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 KIF28PB7ZC32 967 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 BAIAP3O94812 1187 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 FGRP09769 529 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 TXNP10599 105 aaKnown RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 CHMP4BP1P59074 171 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 BFSP2Q13515 415 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 PWP2Q15269 919 aaKnown RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 PTGISQ16647 500 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 RNF207Q6ZRF8 634 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.42□□□□□ -0.42
RNF41-211ENST00000552656 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 WNT8BQ93098 351 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 MTUS1Q9ULD2 1270 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 MICAL3Q7RTP6 2002 aa12.42□□□□□ -0.42
RNF41-211ENST00000552656 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNF41-211ENST00000552656 ORC4O43929 436 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 CXCL10P02778 98 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 PDHBP11177 359 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 IL9P15248 144 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 PDE4DQ08499 809 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 AFG1LQ8WV93 481 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 GPATCH3Q96I76 525 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 FSD1Q9BTV5 496 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 UBE2ZQ9H832 354 aaPredicted RBP12.41□□□□□ -0.42
RNF41-211ENST00000552656 LMCD1Q9NZU5 365 aa12.41□□□□□ -0.42
RNF41-211ENST00000552656 TRIOO75962 3097 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 LINC01553A4QN01 128 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 KPNA6O60684 536 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 GJB5O95377 273 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 MMP3P08254 477 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 KCNJ6P48051 423 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 ERVK-21P61565 698 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 ARHGAP1Q07960 439 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 RBL2Q08999 1139 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 HIC1Q14526 733 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 MBTPS1Q14703 1052 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 TRIM71Q2Q1W2 868 aaKnown RBP12.4□□□□□ -0.42
RNF41-211ENST00000552656 LRRC8DQ7L1W4 858 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 ALYREFQ86V81 257 aaKnown RBP12.4□□□□□ -0.42
RNF41-211ENST00000552656 SESTD1Q86VW0 696 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 AFAP1L1Q8TED9 768 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 NOD1Q9Y239 953 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 MYH6P13533 1939 aa12.4□□□□□ -0.42
RNF41-211ENST00000552656 TTC41PQ6P2S7 1318 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 RAD50Q92878 1312 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 SNHG28P0DPA3 235 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 CKBP12277 381 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 SELPP16109 830 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
RNF41-211ENST00000552656 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
RNF41-211ENST00000552656 BRDTQ58F21 947 aaPredicted RBP12.39□□□□□ -0.43
RNF41-211ENST00000552656 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 FAM117BQ6P1L5 589 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
RNF41-211ENST00000552656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms