RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 MMP19Q99542 508 aa10.28□□□□□ -0.76
PRIM1-208ENST00000552590 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRIM1-208ENST00000552590 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
PRIM1-208ENST00000552590 GNL3LQ9NVN8 582 aaKnown RBP10.28□□□□□ -0.76
PRIM1-208ENST00000552590 HOXC10Q9NYD6 342 aa10.28□□□□□ -0.76
PRIM1-208ENST00000552590 C9orf78Q9NZ63 289 aaPredicted RBP10.28□□□□□ -0.76
PRIM1-208ENST00000552590 WASF2Q9Y6W5 498 aa10.28□□□□□ -0.76
PRIM1-208ENST00000552590 FRYQ5TBA9 3013 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 CTAGE5O15320 804 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 SIAH2O43255 324 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 MBTPS2O43462 519 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 SNAI1O95863 264 aaPredicted RBP10.27□□□□□ -0.77
PRIM1-208ENST00000552590 CYP2C9P11712 490 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 MECOMQ03112 1051 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 COL19A1Q14993 1142 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 METTL3Q86U44 580 aaKnown RBP10.27□□□□□ -0.77
PRIM1-208ENST00000552590 TEX11Q8IYF3 940 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.77
PRIM1-208ENST00000552590 BANK1Q8NDB2 785 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 RUNDC1Q96C34 613 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
PRIM1-208ENST00000552590 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
PRIM1-208ENST00000552590 MCM3APO60318 1980 aa10.26□□□□□ -0.77
PRIM1-208ENST00000552590 DLX2Q07687 328 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-208ENST00000552590 RAB3GAP1Q15042 981 aa10.26□□□□□ -0.77
PRIM1-208ENST00000552590 MCTP2Q6DN12 878 aa10.26□□□□□ -0.77
PRIM1-208ENST00000552590 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
PRIM1-208ENST00000552590 C17orf80Q9BSJ5 609 aa10.26□□□□□ -0.77
PRIM1-208ENST00000552590 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
PRIM1-208ENST00000552590 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-208ENST00000552590 SPEGQ15772 3267 aa10.26□□□□□ -0.77
PRIM1-208ENST00000552590 DDX11L8A8MPP1 907 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
PRIM1-208ENST00000552590 KCNJ6P48051 423 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 PSMC6P62333 389 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 TIGD5Q53EQ6 642 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 RPAINQ86UA6 219 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 FOXP4Q8IVH2 680 aaPredicted RBP10.25□□□□□ -0.77
PRIM1-208ENST00000552590 SH3RF3Q8TEJ3 882 aaPredicted RBP10.25□□□□□ -0.77
PRIM1-208ENST00000552590 TANGO6Q9C0B7 1094 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 DHX36Q9H2U1 1008 aaKnown RBP10.25□□□□□ -0.77
PRIM1-208ENST00000552590 BICC1Q9H694 974 aaKnown RBP10.25□□□□□ -0.77
PRIM1-208ENST00000552590 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
PRIM1-208ENST00000552590 DEFB103AP81534 67 aa10.24□□□□□ -0.77
PRIM1-208ENST00000552590 PTPROQ16827 1216 aa10.24□□□□□ -0.77
PRIM1-208ENST00000552590 CCDC144BQ3MJ40 725 aa10.24□□□□□ -0.77
PRIM1-208ENST00000552590 MAPKAPK5Q8IW41 473 aa10.24□□□□□ -0.77
PRIM1-208ENST00000552590 TRMT13Q9NUP7 481 aaKnown RBP10.24□□□□□ -0.77
PRIM1-208ENST00000552590 CTNNA3Q9UI47 895 aa10.24□□□□□ -0.77
PRIM1-208ENST00000552590 PALD1Q9ULE6 856 aa10.24□□□□□ -0.77
PRIM1-208ENST00000552590 MAP4K4O95819 1239 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 WDR5P61964 334 aaKnown RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 SMAD4Q13485 552 aaKnown RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ACVR2BQ13705 512 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 RASGRF1Q13972 1273 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 MB21D1Q8N884 522 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ATG4CQ96DT6 458 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 CRBNQ96SW2 442 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 RAD9AQ99638 391 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 SH2B1Q9NRF2 756 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 BPTFQ12830 3046 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 COL11A1P12107 1806 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 LOC730098B7Z3J9 87 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 CABYRO75952 493 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 BAIAP3O94812 1187 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 SLC25A27O95847 323 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 NBPF7P0C2Y1 421 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 RFC2P35250 354 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 TMEM132BQ14DG7 1078 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ATP2B3Q16720 1220 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 TWISTNBQ3B726 338 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 FAM117BQ6P1L5 589 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ANKRD44Q8N8A2 993 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 TMEM105Q8N8V8 129 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 KCNG4Q8TDN1 519 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 CHAMP1Q96JM3 812 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 SIL1Q9H173 461 aa10.23□□□□□ -0.77
PRIM1-208ENST00000552590 NSUN3Q9H649 340 aaKnown RBP10.23□□□□□ -0.77
PRIM1-208ENST00000552590 ASTN1O14525 1302 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
PRIM1-208ENST00000552590 A0A1B0GUL7 405 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 RBAK-RBAKDNI3L0D1 243 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 GJB5O95377 273 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 PTGS1P23219 599 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 RABL6Q3YEC7 729 aaPredicted RBP10.22□□□□□ -0.77
PRIM1-208ENST00000552590 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 RIPOR3Q96MK2 946 aa10.22□□□□□ -0.77
PRIM1-208ENST00000552590 SAP30BPQ9UHR5 308 aaKnown RBP10.22□□□□□ -0.77
PRIM1-208ENST00000552590 SOBPA7XYQ1 873 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 EYA2O00167 538 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 FLOT1O75955 427 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 LDHCP07864 332 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms