RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 PNMA2Q9UL42 364 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 CXCL10P02778 98 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 CHGBP05060 677 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 APPP05067 770 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 BAATQ14032 418 aaPredicted RBP18.13■□□□□ 0.49
CACNB3-220ENST00000551716 LRRC8DQ7L1W4 858 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
CACNB3-220ENST00000551716 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 INSL6Q9Y581 213 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 PLIN4Q96Q06 1357 aa18.13■□□□□ 0.49
CACNB3-220ENST00000551716 TFAP4Q01664 338 aa18.12■□□□□ 0.49
CACNB3-220ENST00000551716 PDE4DQ08499 809 aa18.12■□□□□ 0.49
CACNB3-220ENST00000551716 SESTD1Q86VW0 696 aa18.12■□□□□ 0.49
CACNB3-220ENST00000551716 FBXO22Q8NEZ5 403 aa18.12■□□□□ 0.49
CACNB3-220ENST00000551716 SAMD11Q96NU1 681 aa18.12■□□□□ 0.49
CACNB3-220ENST00000551716 NACAP1Q9BZK3 213 aa18.12■□□□□ 0.49
CACNB3-220ENST00000551716 NCK2O43639 380 aa18.11■□□□□ 0.49
CACNB3-220ENST00000551716 DEFB103AP81534 67 aa18.11■□□□□ 0.49
CACNB3-220ENST00000551716 RBL2Q08999 1139 aa18.11■□□□□ 0.49
CACNB3-220ENST00000551716 TIGD5Q53EQ6 642 aa18.11■□□□□ 0.49
CACNB3-220ENST00000551716 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
CACNB3-220ENST00000551716 APPBP2Q92624 585 aa18.11■□□□□ 0.49
CACNB3-220ENST00000551716 PURBQ96QR8 312 aaKnown RBP18.11■□□□□ 0.49
CACNB3-220ENST00000551716 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
CACNB3-220ENST00000551716 C19orf67A6NJJ6 358 aa18.1■□□□□ 0.49
CACNB3-220ENST00000551716 PATL2C9JE40 543 aaKnown RBP18.1■□□□□ 0.49
CACNB3-220ENST00000551716 ZFYP08048 801 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-220ENST00000551716 TXNP10599 105 aaKnown RBP18.1■□□□□ 0.49
CACNB3-220ENST00000551716 CHMP4BP1P59074 171 aa18.1■□□□□ 0.49
CACNB3-220ENST00000551716 GPNMBQ14956 572 aa18.1■□□□□ 0.49
CACNB3-220ENST00000551716 TMCO2Q7Z6W1 182 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-220ENST00000551716 PABPC5Q96DU9 382 aaKnown RBP18.1■□□□□ 0.49
CACNB3-220ENST00000551716 SCN5AQ14524 2016 aa18.1■□□□□ 0.49
CACNB3-220ENST00000551716 ST18O60284 1047 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 SNAP25P60880 206 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 ZP2Q05996 745 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 PKN1Q16512 942 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 ADHFE1Q8IWW8 467 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 DNERQ8NFT8 737 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 PRRX2Q99811 253 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 STX8Q9UNK0 236 aa18.09■□□□□ 0.49
CACNB3-220ENST00000551716 SCN10AQ9Y5Y9 1956 aa18.08■□□□□ 0.49
CACNB3-220ENST00000551716 H3BQ06 376 aaPredicted RBP18.08■□□□□ 0.48
CACNB3-220ENST00000551716 RNF113AO15541 343 aaKnown RBP18.08■□□□□ 0.48
CACNB3-220ENST00000551716 GPAA1O43292 621 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 MS4A1P11836 297 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 CKBP12277 381 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 CASTP20810 708 aaKnown RBP18.08■□□□□ 0.48
CACNB3-220ENST00000551716 RNF207Q6ZRF8 634 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 HFE2Q6ZVN8 426 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 IFNL3Q8IZI9 196 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 KBTBD3Q8NAB2 608 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 BANK1Q8NDB2 785 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 OSBP2Q969R2 916 aa18.08■□□□□ 0.48
CACNB3-220ENST00000551716 POP1Q99575 1024 aaKnown RBP18.08■□□□□ 0.48
CACNB3-220ENST00000551716 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.48
CACNB3-220ENST00000551716 NBNO60934 754 aa18.07■□□□□ 0.48
CACNB3-220ENST00000551716 AMHP03971 560 aa18.07■□□□□ 0.48
CACNB3-220ENST00000551716 CALML3P27482 149 aa18.07■□□□□ 0.48
CACNB3-220ENST00000551716 GDF6Q6KF10 455 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-220ENST00000551716 PPP1R13LQ8WUF5 828 aa18.07■□□□□ 0.48
CACNB3-220ENST00000551716 DCAF4Q8WV16 495 aa18.07■□□□□ 0.48
CACNB3-220ENST00000551716 EPB41L4AQ9HCS5 686 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-220ENST00000551716 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 EMSYQ7Z589 1322 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 NFIBO00712 420 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 EDNRBP24530 442 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 COL19A1Q14993 1142 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 FAM117BQ6P1L5 589 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 TET1Q8NFU7 2136 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 CHMP4CQ96CF2 233 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 CTAGE1Q96RT6 745 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 C17orf80Q9BSJ5 609 aa18.06■□□□□ 0.48
CACNB3-220ENST00000551716 TSPY2A6NKD2 308 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 H3BNC9 293 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 GH1P01241 217 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 PTPN5P54829 565 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 HTRA4P83105 476 aaPredicted RBP18.05■□□□□ 0.48
CACNB3-220ENST00000551716 FOXK2Q01167 660 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 PTK7Q13308 1070 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 CCDC96Q2M329 555 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 EPC2Q52LR7 807 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 EP400NLQ6ZTU2 488 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
CACNB3-220ENST00000551716 COPS5Q92905 334 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 MAF1Q9H063 256 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 CHMP4BQ9H444 224 aaKnown RBP18.05■□□□□ 0.48
CACNB3-220ENST00000551716 NSUN3Q9H649 340 aaKnown RBP18.05■□□□□ 0.48
CACNB3-220ENST00000551716 ECHDC1Q9NTX5 307 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 GTF2IRD1Q9UHL9 959 aa18.05■□□□□ 0.48
CACNB3-220ENST00000551716 COL4A4P53420 1690 aaPredicted RBP18.04■□□□□ 0.48
CACNB3-220ENST00000551716 LGR5O75473 907 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 PPARAQ07869 468 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 GPM6BQ13491 265 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 DGKDQ16760 1214 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 HERC4Q5GLZ8 1057 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms