RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
CTDSP2-207ENST00000551594 TMEM260Q9NX78 707 aa21.57■■□□□ 1.04
CTDSP2-207ENST00000551594 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.57■■□□□ 1.04
CTDSP2-207ENST00000551594 KCNJ14Q9UNX9 436 aa21.57■■□□□ 1.04
CTDSP2-207ENST00000551594 SYNGAP1Q96PV0 1343 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 NLRP5P59047 1200 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 EEPD1Q7L9B9 569 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 MSL3Q8N5Y2 521 aaKnown RBP21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 CCDC148Q8NFR7 591 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 SNX21Q969T3 373 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 ABHD8Q96I13 439 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 PGBD1Q96JS3 809 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 C6orf50Q9HD87 102 aa21.56■■□□□ 1.04
CTDSP2-207ENST00000551594 ESYT2A0FGR8 921 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 CCL5P13501 91 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 JAKMIP3Q5VZ66 844 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 IL31RAQ8NI17 732 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 RASGRP4Q8TDF6 673 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 MORC4Q8TE76 937 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 WASF1Q92558 559 aa21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 ZFP91Q96JP5 570 aaPredicted RBP21.55■■□□□ 1.04
CTDSP2-207ENST00000551594 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 CYBAP13498 195 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 EDNRBP24530 442 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 CNGA1P29973 690 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 PDE4DQ08499 809 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 KATNBL1Q9H079 304 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 ZHX1Q9UKY1 873 aaPredicted RBP21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 PCDHA6Q9UN73 950 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 CNPY2Q9Y2B0 182 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 PCDHA8Q9Y5H6 950 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 LRRC37A2A6NM11 1700 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 RPTORQ8N122 1335 aa21.54■■□□□ 1.04
CTDSP2-207ENST00000551594 K7ELQ4 463 aaPredicted RBP21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 NR3C2P08235 984 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 ZNF865P0CJ78 1059 aaPredicted RBP21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 GNA11P29992 359 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 CLK2P49760 499 aaKnown RBP21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 HMGN5P82970 282 aaKnown RBP21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 CUL4AQ13619 759 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 ACVR2BQ13705 512 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 PGM5Q15124 567 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 NPY5RQ15761 445 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 FBXO16Q8IX29 292 aaPredicted RBP21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 RNF208Q9H0X6 261 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 GLT8D2Q9H1C3 349 aa21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 HMX1Q9NP08 348 aaPredicted RBP21.53■■□□□ 1.04
CTDSP2-207ENST00000551594 KIAA0100Q14667 2235 aaKnown RBP21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 LOC102724159A0A0B4J2E5 919 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 SPDYE3A6NKU9 549 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 PWP2Q15269 919 aaKnown RBP21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 REXO1Q8N1G1 1221 aaKnown RBP21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 FAM184AQ8NB25 1140 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 IWS1Q96ST2 819 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 PHF20Q9BVI0 1012 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.52■■□□□ 1.041e-8■■■□□ 15.3
CTDSP2-207ENST00000551594 ABHD16BQ9H3Z7 469 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 PDGFCQ9NRA1 345 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 PCDHA4Q9UN74 947 aa21.52■■□□□ 1.04
CTDSP2-207ENST00000551594 B4DLN1 442 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 XBP1P17861 261 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 GUCY1B3Q02153 619 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 ANO1Q5XXA6 986 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 HSCBQ8IWL3 235 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 BLIDQ8IZY5 108 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 BICD2Q8TD16 824 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 MPHOSPH6Q99547 160 aaKnown RBP21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 ANO3Q9BYT9 981 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 FOXD4L1Q9NU39 408 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 FRMPD4Q14CM0 1322 aa21.51■■□□□ 1.03
CTDSP2-207ENST00000551594 BRCA2P51587 3418 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 GJB2P29033 226 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 STXBP2Q15833 593 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 TMEM63BQ5T3F8 832 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 KRT40Q6A162 431 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 TAPT1Q6NXT6 567 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 OXER1Q8TDS5 423 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 PAK6Q9NQU5 681 aaPredicted RBP21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 NRBP1Q9UHY1 535 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 SMC3Q9UQE7 1217 aa21.5■■□□□ 1.03
CTDSP2-207ENST00000551594 KIAA1217Q5T5P2 1943 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 CCDC85CA6NKD9 419 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 FOSP01100 380 aaPredicted RBP21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 CCND2P30279 289 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 MRPS9P82933 396 aaKnown RBP21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 CCDC144BQ3MJ40 725 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 SEPT14Q6ZU15 432 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 FAM177A1Q8N128 213 aaPredicted RBP21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 DAGLBQ8NCG7 672 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 LENG1Q96BZ8 264 aaPredicted RBP21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 C8orf76Q96K31 380 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 DEFB118Q96PH6 123 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.49■■□□□ 1.03
CTDSP2-207ENST00000551594 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.48■■□□□ 1.03
CTDSP2-207ENST00000551594 M0R2N6 131 aa21.48■■□□□ 1.03
CTDSP2-207ENST00000551594 SEPT4O43236 478 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms