RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 RMI1Q9H9A7 625 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 ATP6V1DQ9Y5K8 247 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 FGRP09769 529 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 PDCD2Q16342 344 aaPredicted RBP23.41■■□□□ 1.34
NPAS3-210ENST00000551492 SLC35G1Q2M3R5 365 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 ZCWPW1Q9H0M4 648 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 GPCPD1Q9NPB8 672 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 SUGT1Q9Y2Z0 365 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 KIF13BQ9NQT8 1826 aa23.41■■□□□ 1.34
NPAS3-210ENST00000551492 USP17L5A8MUK1 530 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 BECN2A8MW95 431 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 OATP04181 439 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 SSBP05455 408 aaKnown RBP eCLIP23.4■■□□□ 1.34
NPAS3-210ENST00000551492 CDC25CP30307 473 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 BRCA1P38398 1863 aaKnown RBP23.4■■□□□ 1.34
NPAS3-210ENST00000551492 C8orf76Q96K31 380 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 SOGA3Q5TF21 947 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 TLDC1Q6P9B6 456 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 BCAS4Q8TDM0 211 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 TBC1D5Q92609 795 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 HDAC9Q9UKV0 1011 aa23.4■■□□□ 1.34
NPAS3-210ENST00000551492 PUF60Q9UHX1 559 aaKnown RBP23.39■■□□□ 1.34
NPAS3-210ENST00000551492 NAV1Q8NEY1 1877 aa23.39■■□□□ 1.34
NPAS3-210ENST00000551492 FAM205CA6NFA0 338 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 TMCO5BA8MYB1 307 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 SFPQP23246 707 aaKnown RBP eCLIP23.39■■□□□ 1.33
NPAS3-210ENST00000551492 GSDMDP57764 484 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 GABPAQ06546 454 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 TTBK2Q6IQ55 1244 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 KCTD1Q719H9 257 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 FER1L6Q2WGJ9 1857 aa23.39■■□□□ 1.33
NPAS3-210ENST00000551492 CCP110O43303 1012 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 TPD52L2O43399 206 aaKnown RBP23.38■■□□□ 1.33
NPAS3-210ENST00000551492 GBP2P32456 591 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-210ENST00000551492 RASA3Q14644 834 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 CCDC181Q5TID7 509 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-210ENST00000551492 TMTC2Q8N394 836 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 OXER1Q8TDS5 423 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 DHX58Q96C10 678 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 DDX60LQ5H9U9 1706 aaKnown RBP23.38■■□□□ 1.33
NPAS3-210ENST00000551492 GH2P01242 217 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 HLA-DOAP06340 250 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 NCAPG2Q86XI2 1143 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-210ENST00000551492 BLOC1S6Q9UL45 172 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 MAST2Q6P0Q8 1798 aa23.38■■□□□ 1.33
NPAS3-210ENST00000551492 NR5A1Q13285 461 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 CLSTN2Q9H4D0 955 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 GOLGA8FQ08AF8 430 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 GOLGA8DPQ0D2H9 430 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 IGSF22Q8N9C0 903 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 YIPF2Q9BWQ6 316 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 ECE1P42892 770 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-210ENST00000551492 GNG11P61952 73 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 CERKLQ49MI3 558 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-210ENST00000551492 RINLQ6ZS11 566 aa23.37■■□□□ 1.33
NPAS3-210ENST00000551492 EZH1Q92800 747 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-210ENST00000551492 POLR2AP24928 1970 aaKnown RBP23.36■■□□□ 1.33
NPAS3-210ENST00000551492 GOLGA6L4A6NEF3 574 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 ZEB2O60315 1214 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 SYF2O95926 243 aaKnown RBP23.36■■□□□ 1.33
NPAS3-210ENST00000551492 IRAK1P51617 712 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 SSRP1Q08945 709 aaKnown RBP23.36■■□□□ 1.33
NPAS3-210ENST00000551492 HACL1Q9UJ83 578 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 FZD9O00144 591 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 ANGEL2Q5VTE6 544 aaKnown RBP23.36■■□□□ 1.33
NPAS3-210ENST00000551492 FAM228AQ86W67 206 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 SCLT1Q96NL6 688 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.36■■□□□ 1.33
NPAS3-210ENST00000551492 TMOD2Q9NZR1 351 aa23.36■■□□□ 1.33
NPAS3-210ENST00000551492 BTBD18B2RXH4 712 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 RHOXF2BP0C7M4 288 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 KRT40Q6A162 431 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 ACRBPQ8NEB7 543 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 RHOXF2Q9BQY4 288 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 YIPF3Q9GZM5 350 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 PI4KBQ9UBF8 816 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 CYTH3O43739 400 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 DHX40Q8IX18 779 aaKnown RBP23.35■■□□□ 1.33
NPAS3-210ENST00000551492 CEP112Q8N8E3 955 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 RASGRP4Q8TDF6 673 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 UIMC1Q96RL1 719 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 TSGA10Q9BZW7 698 aa23.35■■□□□ 1.33
NPAS3-210ENST00000551492 LAMB3Q13751 1172 aa23.34■■□□□ 1.33
NPAS3-210ENST00000551492 TNIP1Q15025 636 aa23.34■■□□□ 1.33
NPAS3-210ENST00000551492 NBPF12Q5TAG4 269 aaPredicted RBP23.34■■□□□ 1.33
NPAS3-210ENST00000551492 RBM43Q6ZSC3 357 aaKnown RBP23.34■■□□□ 1.33
NPAS3-210ENST00000551492 HNRNPLLQ8WVV9 542 aaKnown RBP23.34■■□□□ 1.33
NPAS3-210ENST00000551492 PRPF6O94906 941 aaKnown RBP23.34■■□□□ 1.33
NPAS3-210ENST00000551492 TFRCP02786 760 aaKnown RBP23.34■■□□□ 1.33
NPAS3-210ENST00000551492 LMNB1P20700 586 aa23.34■■□□□ 1.33
NPAS3-210ENST00000551492 VSNL1P62760 191 aa23.34■■□□□ 1.33
NPAS3-210ENST00000551492 FMR1Q06787 632 aaKnown RBP eCLIP23.34■■□□□ 1.33
NPAS3-210ENST00000551492 ACER1Q8TDN7 264 aa23.34■■□□□ 1.33
NPAS3-210ENST00000551492 IDI2Q9BXS1 227 aa23.34■■□□□ 1.33
NPAS3-210ENST00000551492 ZNF202O95125 648 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms