RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 A6NJR5 290 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 B4E1Z4 1266 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 ZNF213O14771 459 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 CHMP4BP1P59074 171 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 DGKHQ86XP1 1220 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 TICAM2Q86XR7 235 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 ADGRF4Q8IZF3 695 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 DNERQ8NFT8 737 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 SCFD2Q8WU76 684 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 GPHNQ9NQX3 736 aaPredicted RBP20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 LAMA4Q16363 1823 aa20.98■□□□□ 0.95
PRPF40B-215ENST00000551418 REV3LO60673 3130 aa20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 RFXAPO00287 272 aa20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 SUPT20HL2P0C7V6 817 aa20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 PCP11498 1178 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 ATP2A2P16615 1042 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 CDC37Q16543 378 aaPredicted RBP20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 CCDC62Q6P9F0 684 aa20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 CHD1LQ86WJ1 897 aa20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 PNMA1Q8ND90 353 aa20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 SYTL5Q8TDW5 730 aaPredicted RBP20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 RNF41Q9H4P4 317 aaPredicted RBP20.97■□□□□ 0.95
PRPF40B-215ENST00000551418 MYH6P13533 1939 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 NKRFO15226 690 aaKnown RBP eCLIP20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 ARHGEF15O94989 841 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 LY6KQ17RY6 165 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 GPATCH4Q5T3I0 446 aaKnown RBP20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 SEPT14Q6ZU15 432 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 AFG1LQ8WV93 481 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 ANKS1AQ92625 1134 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 SYMPKQ92797 1274 aaKnown RBP20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 CTAGE1Q96RT6 745 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 IL25Q9H293 177 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 VAT1LQ9HCJ6 419 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 ZSWIM5Q9P217 1185 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 PCDHA11Q9Y5I1 949 aa20.96■□□□□ 0.95
PRPF40B-215ENST00000551418 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 NUCB1Q02818 461 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 PPP2R2DQ66LE6 453 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 ENAHQ8N8S7 591 aaPredicted RBP20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 ZSCAN10Q96SZ4 725 aaPredicted RBP20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 OSBPL3Q9H4L5 887 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 CERS4Q9HA82 394 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 PNMA2Q9UL42 364 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 KIAA1217Q5T5P2 1943 aa20.95■□□□□ 0.94
PRPF40B-215ENST00000551418 ARHGAP1Q07960 439 aa20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 QRICH1Q2TAL8 776 aa20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 NFRKBQ6P4R8 1299 aa20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 ASB2Q96Q27 587 aa20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 KAT14Q9H8E8 782 aa20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 JMJD4Q9H9V9 463 aa20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 TCF20Q9UGU0 1960 aaKnown RBP20.94■□□□□ 0.94
PRPF40B-215ENST00000551418 PRRC2BQ5JSZ5 2229 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 TANC1Q9C0D5 1861 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 EPOPA6NHQ4 379 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 CA3P07451 260 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 GPNMBQ14956 572 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 BRDTQ58F21 947 aaPredicted RBP20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 CHST3Q7LGC8 479 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 SPRED2Q7Z698 418 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 MICALL1Q8N3F8 863 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 STAG2Q8N3U4 1231 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 ATXN2LQ8WWM7 1075 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 KAT2BQ92831 832 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 DIAPH3Q9NSV4 1193 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 THEGQ9P2T0 379 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 MYH7BA7E2Y1 1941 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 PTPRSQ13332 1948 aa20.93■□□□□ 0.94
PRPF40B-215ENST00000551418 OPLAHO14841 1288 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 KPNA6O60684 536 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 MMP3P08254 477 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 KRT40Q6A162 431 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 GDF6Q6KF10 455 aaPredicted RBP20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 IQCA1Q86XH1 822 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 RMDN3Q96TC7 470 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 MPHOSPH6Q99547 160 aaKnown RBP20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 ABCB11O95342 1321 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 RAD50Q92878 1312 aa20.92■□□□□ 0.94
PRPF40B-215ENST00000551418 TNFRSF10AO00220 468 aa20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 PFKMP08237 780 aa20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 EIF2AK2P19525 551 aaKnown RBP20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 PTGISQ16647 500 aa20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 TMEM67Q5HYA8 995 aa20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 TMCO2Q7Z6W1 182 aaPredicted RBP20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 RETREG2Q8NC44 543 aa20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 NSUN6Q8TEA1 469 aaKnown RBP20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 DHX38Q92620 1227 aaKnown RBP20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 FTOQ9C0B1 505 aaKnown RBP eCLIP20.91■□□□□ 0.94
PRPF40B-215ENST00000551418 PITPNM1O00562 1244 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 GH1P01241 217 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 PTPN11Q06124 597 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 SLC35G1Q2M3R5 365 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 TCTN1Q2MV58 587 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms