RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 PRR5P85299 388 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 RBL2Q08999 1139 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 MAP4K2Q12851 820 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 RASGRF1Q13972 1273 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 TARBP2Q15633 366 aaKnown RBP8.09□□□□□ -1.11
LETMD1-226ENST00000550755 INF2Q27J81 1249 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 MBLAC2Q68D91 279 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 WWC2Q6AWC2 1192 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 KREMEN2Q8NCW0 462 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 MZB1Q8WU39 189 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 SREK1Q8WXA9 508 aaKnown RBP8.09□□□□□ -1.11
LETMD1-226ENST00000550755 SIGLEC10Q96LC7 697 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 MSRB2Q9Y3D2 182 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 TRAV20A0A0B4J274 112 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 NUAK1O60285 661 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 PPP1R11O60927 126 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-226ENST00000550755 PFKLP17858 780 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 ZNF200P98182 395 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-226ENST00000550755 CYP4F3Q08477 520 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 IFRD2Q12894 506 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-226ENST00000550755 SLC9A5Q14940 896 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 ZNF385BQ569K4 471 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-226ENST00000550755 TRMT2BQ96GJ1 504 aaKnown RBP8.08□□□□□ -1.12
LETMD1-226ENST00000550755 CHAMP1Q96JM3 812 aa8.08□□□□□ -1.12
LETMD1-226ENST00000550755 C22orf46C9J442 243 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 PRODHO43272 600 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 ZBTB7AO95365 584 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 CDR1P51861 262 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 EPHB3P54753 998 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 JAG1P78504 1218 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 FZD5Q13467 585 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 DCP2Q8IU60 420 aaKnown RBP8.07□□□□□ -1.12
LETMD1-226ENST00000550755 CCDC103Q8IW40 242 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 TEX2Q8IWB9 1127 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 DPF3Q92784 378 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
LETMD1-226ENST00000550755 AP5M1Q9H0R1 490 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 TMEFF2Q9UIK5 374 aaPredicted RBP8.07□□□□□ -1.12
LETMD1-226ENST00000550755 COA3Q9Y2R0 106 aaPredicted RBP8.07□□□□□ -1.12
LETMD1-226ENST00000550755 PCDHA2Q9Y5H9 948 aa8.07□□□□□ -1.12
LETMD1-226ENST00000550755 NTRK1P04629 796 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 FGFR1P11362 822 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 SSRP1Q08945 709 aaKnown RBP8.06□□□□□ -1.12
LETMD1-226ENST00000550755 TESK1Q15569 626 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 NSMFQ6X4W1 530 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 CEP68Q76N32 757 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 PLEKHO2Q8TD55 490 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 ALG3Q92685 438 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 TMEM169Q96HH4 297 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 SPATA9Q9BWV2 254 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 RXFP1Q9HBX9 757 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 KCTD3Q9Y597 815 aa8.06□□□□□ -1.12
LETMD1-226ENST00000550755 CAPNS1P04632 268 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 PABPC1P11940 636 aaKnown RBP8.05□□□□□ -1.12
LETMD1-226ENST00000550755 CFPP27918 469 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 BCL6P41182 706 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 LSAMPQ13449 338 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 LCE3BQ5TA77 95 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 MROH9Q5TGP6 573 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 USP53Q70EK8 1073 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 DPH6Q7L8W6 267 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 LRP10Q7Z4F1 713 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 RCBTB1Q8NDN9 531 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 TSPAN17Q96FV3 270 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 CDC6Q99741 560 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 ARHGEF4Q9NR80 690 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 FBLN5Q9UBX5 448 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 PFDN2Q9UHV9 154 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 FAN1Q9Y2M0 1017 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 PCDHA5Q9Y5H7 936 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 HCFC2Q9Y5Z7 792 aa8.05□□□□□ -1.12
LETMD1-226ENST00000550755 DLX3O60479 287 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 BUB1BO60566 1050 aaPredicted RBP8.04□□□□□ -1.12
LETMD1-226ENST00000550755 NCKAP1LP55160 1127 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 DENND5AQ6IQ26 1287 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 SPATC1Q76KD6 591 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 TMEM151BQ8IW70 566 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 C1orf159Q96HA4 380 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 DEPDC7Q96QD5 511 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 IRF2BPLQ9H1B7 796 aa8.04□□□□□ -1.12
LETMD1-226ENST00000550755 NCAM1P13591 858 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 PI3P19957 117 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 FPR2P25090 351 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 SERINC3Q13530 473 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 RSPO2Q6UXX9 243 aaPredicted RBP8.03□□□□□ -1.12
LETMD1-226ENST00000550755 RIOX2Q8IUF8 465 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 IGDCC3Q8IVU1 814 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 DCAF4Q8WV16 495 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 SRPK1Q96SB4 655 aaKnown RBP8.03□□□□□ -1.12
LETMD1-226ENST00000550755 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 GPR27Q9NS67 375 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 IRS2Q9Y4H2 1338 aa8.03□□□□□ -1.12
LETMD1-226ENST00000550755 H7BY64 318 aa8.02□□□□□ -1.13
LETMD1-226ENST00000550755 IRS4O14654 1257 aaPredicted RBP8.02□□□□□ -1.13
LETMD1-226ENST00000550755 LCP1P13796 627 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms