RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 FLT3LGP49771 235 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 CTBSQ01459 385 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 EXOSC10Q01780 885 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 PRKCZQ05513 592 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 NFIAQ12857 509 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 LBRQ14739 615 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 SBK1Q52WX2 424 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 BLOC1S2Q6QNY1 142 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 DHX32Q7L7V1 743 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 PRRT2Q7Z6L0 340 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 FBXL16Q8N461 479 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 EDARADDQ8WWZ3 215 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 UPF3BQ9BZI7 483 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 OSBPL5Q9H0X9 879 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 AS3MTQ9HBK9 375 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 EPB41L4AQ9HCS5 686 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 DCP1AQ9NPI6 582 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 PDRG1Q9NUG6 133 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 ANAPC4Q9UJX5 808 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 A0A1W2PPC1 479 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 USP17L21D6R901 530 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 FGRP09769 529 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 PCP11498 1178 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 BMP4P12644 408 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 PLA2G4AP47712 749 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 TDO2P48775 406 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 RHBDL3P58872 404 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 HAND2P61296 217 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 TRDNQ13061 729 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 ANKRD1Q15327 319 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 AKNAD1Q5T1N1 836 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 CTR9Q6PD62 1173 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 MFSD6Q6ZSS7 791 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 STOX1Q6ZVD7 989 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 NECAB2Q7Z6G3 386 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 ANKRD13CQ8N6S4 541 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 NCOA7Q8NI08 942 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 SDR42E1Q8WUS8 393 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 DEFB118Q96PH6 123 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 RNF41Q9H4P4 317 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 CNNM2Q9H8M5 875 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 CWC22Q9HCG8 908 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 PRM3Q9NNZ6 103 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 NDFIP2Q9NV92 336 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 TMOD4Q9NZQ9 345 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 GDF2Q9UK05 429 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 ATXN7L1Q9ULK2 861 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 LIMCH1Q9UPQ0 1083 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 WDR19Q8NEZ3 1342 aa7.23□□□□□ -1.25
DEPDC4-209ENST00000550587 LAMA4Q16363 1823 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 USP17L5A8MUK1 530 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 PROCP04070 461 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 INHAP05111 366 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 CPA1P15085 419 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 FGFR3P22607 806 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 CTGFP29279 349 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 MCM5P33992 734 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 USP5P45974 858 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 NT5C2P49902 561 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 AK2P54819 239 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 GDF10P55107 478 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 IRX3P78415 501 aaPredicted RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 PPARAQ07869 468 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 FAM110CQ1W6H9 321 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 RALYLQ86SE5 291 aaKnown RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 ZFPM1Q8IX07 1006 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 TEX11Q8IYF3 940 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 CRACR2BQ8N4Y2 399 aaPredicted RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 ZNF280CQ8ND82 737 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 TGFBRAP1Q8WUH2 860 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 STAG1Q8WVM7 1258 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 ZSCAN31Q96LW9 406 aaPredicted RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 AGXT2Q9BYV1 514 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 KRT23Q9C075 422 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 DHX36Q9H2U1 1008 aaKnown RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 GDPD2Q9HCC8 539 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 HERC5Q9UII4 1024 aaKnown RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 GABRQQ9UN88 632 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 BAZ2AQ9UIF9 1905 aaKnown RBP7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 ADGRA2Q96PE1 1338 aa7.22□□□□□ -1.25
DEPDC4-209ENST00000550587 CDK5RAP2Q96SN8 1893 aa7.21□□□□□ -1.25
DEPDC4-209ENST00000550587 KRBA1A5PL33 1030 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 DDTLA6NHG4 134 aaPredicted RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 MINDY4BA8MYZ0 360 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 HMGCRP04035 888 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 SLC3A2P08195 630 aaKnown RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 ELNP15502 786 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 COL8A1P27658 744 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 ABL2P42684 1182 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 SPP2Q13103 211 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 CUL4AQ13619 759 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 MOGSQ13724 837 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 TPRNQ4KMQ1 711 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 C12orf60Q5U649 245 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 Q6ZUG5 572 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms