RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GSE1Q14687 1217 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 RNF207Q6ZRF8 634 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 RETREG2Q8NC44 543 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 OR6J1Q8NGC5 347 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 SCFD2Q8WU76 684 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 MPHOSPH6Q99547 160 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 TRANK1O15050 2925 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 TRIP12Q14669 1992 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 RAD50Q92878 1312 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 PRRC2BQ5JSZ5 2229 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 BDP1A6H8Y1 2624 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 FGAP02671 866 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 CA3P07451 260 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 PDHBP11177 359 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 MX1P20591 662 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 RPS6P62753 249 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 TFF2Q03403 129 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 TAP1Q03518 808 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 PDE4DQ08499 809 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 BFSP2Q13515 415 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 VPS53Q5VIR6 699 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 RASGRP2Q7LDG7 609 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 HERC6Q8IVU3 1022 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 C1QTNF1Q9BXJ1 281 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 COG5Q9UP83 839 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 SALL3Q9BXA9 1300 aa11.6□□□□□ -0.55
TRAFD1-207ENST00000550051 TET1Q8NFU7 2136 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 RFXAPO00287 272 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 BAIAP3O94812 1187 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 SNHG28P0DPA3 235 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 CALML3P27482 149 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 PPP2R5BQ15173 497 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 FAM47CQ5HY64 1035 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 CCDC62Q6P9F0 684 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 SLC30A10Q6XR72 485 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-207ENST00000550051 TLL1O43897 1013 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 PARNO95453 639 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 MCMDC2Q4G0Z9 681 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 NECAB3Q96P71 396 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 LMCD1Q9NZU5 365 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 RAPGEFL1Q9UHV5 662 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 ZMYM6O95789 1325 aa11.58□□□□□ -0.56
TRAFD1-207ENST00000550051 EPOPA6NHQ4 379 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 HSPD1P10809 573 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 PLA2G5P39877 138 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 NT5C2P49902 561 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 KCNQ1P51787 676 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 RBL2Q08999 1139 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 GPNMBQ14956 572 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 PTGISQ16647 500 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 GPATCH4Q5T3I0 446 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 MICALL1Q8N3F8 863 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 CAGE1Q8TC20 777 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 AFAP1L1Q8TED9 768 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 COPS5Q92905 334 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 CTAGE1Q96RT6 745 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 CERS4Q9HA82 394 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 TANC1Q9C0D5 1861 aa11.57□□□□□ -0.56
TRAFD1-207ENST00000550051 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 LPXNO60711 386 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 ARHGEF15O94989 841 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 ARIH2O95376 493 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 GRB10Q13322 594 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 CCDC155Q8N6L0 562 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 HLA-CQ95604 372 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 FAM122AQ96E09 287 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 IWS1Q96ST2 819 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 PTPRSQ13332 1948 aa11.56□□□□□ -0.56
TRAFD1-207ENST00000550051 ABHD14A-ACY1A0A1B0GW23 586 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms