RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 ULK1O75385 1050 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 SPATA31C1P0DKV0 1188 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 LCP1P13796 627 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
PRIM1-204ENST00000549549 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
PRIM1-204ENST00000549549 RXRBP28702 533 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 IREB2P48200 963 aaKnown RBP11.84□□□□□ -0.51
PRIM1-204ENST00000549549 OCRLQ01968 901 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 TNK2Q07912 1038 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 MLC1Q15049 377 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 KIZQ2M2Z5 673 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 SVOPQ8N4V2 548 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 RCBTB1Q8NDN9 531 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 JPH3Q8WXH2 748 aaPredicted RBP11.84□□□□□ -0.51
PRIM1-204ENST00000549549 TCTN2Q96GX1 697 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 HEXIM2Q96MH2 286 aaKnown RBP11.84□□□□□ -0.51
PRIM1-204ENST00000549549 GPR101Q96P66 508 aaPredicted RBP11.84□□□□□ -0.51
PRIM1-204ENST00000549549 SPTLC3Q9NUV7 552 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 CAPN6Q9Y6Q1 641 aa11.84□□□□□ -0.51
PRIM1-204ENST00000549549 FAM87AP0C7U9 286 aa11.83□□□□□ -0.52
PRIM1-204ENST00000549549 SRGAP2CP0DJJ0 459 aa11.83□□□□□ -0.52
PRIM1-204ENST00000549549 PAOXQ6QHF9 649 aa11.83□□□□□ -0.52
PRIM1-204ENST00000549549 CHTF18Q8WVB6 975 aa11.83□□□□□ -0.52
PRIM1-204ENST00000549549 DUSP15Q9H1R2 295 aaPredicted RBP11.83□□□□□ -0.52
PRIM1-204ENST00000549549 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
PRIM1-204ENST00000549549 GOLGA6CA6NDK9 693 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 GOLGA6BA6NDN3 693 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 PRR33A8MZF0 331 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 PLIN1O60240 522 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 ZNF205O95201 554 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 MYL1P05976 194 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 GOLGA6DP0CG33 693 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.522e-7■□□□□ 10.5
PRIM1-204ENST00000549549 CLEC16AQ2KHT3 1053 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 CXorf57Q6NSI4 855 aaKnown RBP11.82□□□□□ -0.52
PRIM1-204ENST00000549549 KSR1Q8IVT5 923 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 UTP4Q969X6 686 aaKnown RBP11.82□□□□□ -0.52
PRIM1-204ENST00000549549 FUBP3Q96I24 572 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRIM1-204ENST00000549549 THG1LQ9NWX6 298 aaKnown RBP11.82□□□□□ -0.52
PRIM1-204ENST00000549549 GOLGA6AQ9NYA3 693 aa11.82□□□□□ -0.52
PRIM1-204ENST00000549549 FZD9O00144 591 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
PRIM1-204ENST00000549549 NFKBIBQ15653 356 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 PTPN21Q16825 1174 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 OGFOD3Q6PK18 319 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 C16orf59Q7L2K0 433 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 C11orf74Q86VG3 221 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 GATA6Q92908 595 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
PRIM1-204ENST00000549549 LUC7LQ9NQ29 371 aaKnown RBP11.81□□□□□ -0.52
PRIM1-204ENST00000549549 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
PRIM1-204ENST00000549549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.8□□□□□ -0.52
PRIM1-204ENST00000549549 SOD2P04179 222 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 FAM47CQ5HY64 1035 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 FBXW5Q969U6 566 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 NACC1Q96RE7 527 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 ZNF700Q9H0M5 742 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 GPATCH2Q9NW75 528 aa11.8□□□□□ -0.52
PRIM1-204ENST00000549549 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 CCDC66A2RUB6 948 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 GSTA4O15217 222 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 KPNA1P52294 538 aaPredicted RBP11.79□□□□□ -0.52
PRIM1-204ENST00000549549 SESN3P58005 492 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 KLF1Q13351 362 aaPredicted RBP11.79□□□□□ -0.52
PRIM1-204ENST00000549549 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
PRIM1-204ENST00000549549 ADGRE1Q14246 886 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 ARHGAP44Q17R89 818 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 GFOD2Q3B7J2 385 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 OTOP1Q7RTM1 612 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 MFSD4AQ8N468 514 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 USHBP1Q8N6Y0 703 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 LINC00116Q8NCU8 138 aa11.79□□□□□ -0.52
PRIM1-204ENST00000549549 PAMP19021 973 aa11.78□□□□□ -0.52
PRIM1-204ENST00000549549 INF2Q27J81 1249 aa11.78□□□□□ -0.52
PRIM1-204ENST00000549549 AHCYL2Q96HN2 611 aaKnown RBP11.78□□□□□ -0.52
PRIM1-204ENST00000549549 SCYL1Q96KG9 808 aa11.78□□□□□ -0.52
PRIM1-204ENST00000549549 IPPKQ9H8X2 491 aa11.78□□□□□ -0.52
PRIM1-204ENST00000549549 IP6K2Q9UHH9 426 aa11.78□□□□□ -0.52
PRIM1-204ENST00000549549 FAM47E-STBD1D6RA91 191 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 GSTM1P09488 218 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
PRIM1-204ENST00000549549 KRT85P78386 507 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 LACTBP83111 547 aaPredicted RBP11.77□□□□□ -0.53
PRIM1-204ENST00000549549 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
PRIM1-204ENST00000549549 BEND4Q6ZU67 534 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 DGKHQ86XP1 1220 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 MEGF10Q96KG7 1140 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 SPOCK3Q9BQ16 436 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 OXSMQ9NWU1 459 aa11.77□□□□□ -0.53
PRIM1-204ENST00000549549 LUC7L2Q9Y383 392 aaKnown RBP11.77□□□□□ -0.53
PRIM1-204ENST00000549549 NPHP3-ACAD11A0A0J9YXS1 232 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms