RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	CRYGN	Q8WXF5	182 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	SPATA32	Q96LK8	384 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	PORCN	Q9H237	461 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	R3HDML	Q9H3Y0	253 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	CPA4	Q9UI42	421 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	RCOR1	Q9UKL0	485 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	LRRC37A2	A6NM11	1700 aa		13.93	□□□□□ -0.18
ERBB3-208	ENST00000549205	RPTOR	Q8N122	1335 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	GOLGA6L22	H0YM25	854 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	EDIL3	O43854	480 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	BMP15	O95972	392 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	MCM4	P33991	863 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	USP11	P51784	963 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	CRHR2	Q13324	411 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	ORC2	Q13416	577 aa	Predicted RBP	13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	SLC39A14	Q15043	492 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	STK38	Q15208	465 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	PTPA	Q15257	358 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	CSPP1	Q1MSJ5	1256 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	LETM2	Q2VYF4	491 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	C17orf99	Q6UX52	265 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	ANKRD35	Q8N283	1001 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	TMEM87A	Q8NBN3	555 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	LINC00301	Q8NCQ3	95 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	NAP1L4	Q99733	375 aa	Known RBP	13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	EFCC1	Q9HA90	598 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	GDPD2	Q9HCC8	539 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	CEP131	Q9UPN4	1083 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	WDR81	Q562E7	1941 aa		13.92	□□□□□ -0.18
ERBB3-208	ENST00000549205	ELP1	O95163	1332 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	CCNT1	O60563	726 aa	Known RBP	13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	CYP3A4	P08684	503 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	FCER1A	P12319	257 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	GCFC2	P16383	781 aa	Known RBP	13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	MCM7	P33993	719 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	KCTD2	Q14681	263 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	ZNF174	Q15697	407 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	WDR78	Q5VTH9	848 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	PPP4R3A	Q6IN85	833 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	MOXD1	Q6UVY6	613 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	CCAR1	Q8IX12	1150 aa	Known RBP	13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	KCNG4	Q8TDN1	519 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	TAAR1	Q96RJ0	339 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	RMDN3	Q96TC7	470 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	MMP19	Q99542	508 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	PXMP2	Q9NR77	195 aa		13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.91	□□□□□ -0.18
ERBB3-208	ENST00000549205	ZSWIM8	A7E2V4	1837 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	POTEB2	H3BUK9	544 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	SPTLC2	O15270	562 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	CYP3A7	P24462	503 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	MAPK4	P31152	587 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	CIITA	P33076	1130 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	ABRA	Q8N0Z2	381 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	FAM133A	Q8N9E0	248 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	PURB	Q96QR8	312 aa	Known RBP	13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	DOCK5	Q9H7D0	1870 aa		13.9	□□□□□ -0.18
ERBB3-208	ENST00000549205	CASP8AP2	Q9UKL3	1982 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	DNAJC25-GNG10	A0A024R161	153 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	DDX11L8	A8MPP1	907 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	STRN	O43815	780 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	NEMF	O60524	1076 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	TDP2	O95551	362 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	HSPA6	P17066	643 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	UBXN2A	P68543	259 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	ATP2C1	P98194	919 aa	Predicted RBP	13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	CNTN2	Q02246	1040 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	PTGDR	Q13258	359 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	NFKBIB	Q15653	356 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	ARHGEF16	Q5VV41	709 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	PCNX4	Q63HM2	1172 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	C4orf32	Q8N8J7	132 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	JMY	Q8N9B5	988 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	DNER	Q8NFT8	737 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	IL31RA	Q8NI17	732 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	NSUN6	Q8TEA1	469 aa	Known RBP	13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	MBOAT7	Q96N66	472 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	PDCD2L	Q9BRP1	358 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	CFHR5	Q9BXR6	569 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	IVNS1ABP	Q9Y6Y0	642 aa		13.89	□□□□□ -0.19
ERBB3-208	ENST00000549205	LAD1	O00515	517 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	PPP6R2	O75170	966 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	PRPF40A	O75400	957 aa	Known RBP	13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	EIF2AK2	P19525	551 aa	Known RBP	13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	CCND2	P30279	289 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	C1QTNF8	P60827	252 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	PGM5	Q15124	567 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	XRRA1	Q6P2D8	792 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	GPR142	Q7Z601	462 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	PLEKHH3	Q7Z736	793 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	IWS1	Q96ST2	819 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	LMBRD1	Q9NUN5	540 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	ADD3	Q9UEY8	706 aa	Known RBP	13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	DDX25	Q9UHL0	483 aa	Known RBP	13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	ASTN1	O14525	1302 aa		13.88	□□□□□ -0.19
ERBB3-208	ENST00000549205	IGLV3-22	A0A075B6J6	115 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	SOWAHB	A6NEL2	793 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	FAM86B1	E9PN63	330 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms