RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CDC37Q16543 378 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 CCDC144BQ3MJ40 725 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 SUPT20HL1Q3ZLR7 823 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TSHZ3Q63HK5 1081 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 KANK3Q6NY19 840 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 MFSD6Q6ZSS7 791 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TAF4BQ92750 862 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 MROH8Q9H579 483 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PPP1R9AQ9ULJ8 1098 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PTPRJQ12913 1337 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 GOLIM4O00461 696 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 KPNA6O60684 536 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 HNRNPH3P31942 346 aaKnown RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PBX1P40424 430 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 UBE2HP62256 183 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PAK2Q13177 524 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF792Q3KQV3 632 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 EGFLAMQ63HQ2 1017 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 CDCA2Q69YH5 1023 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 ZSCAN29Q8IWY8 852 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 CDAN1Q8IWY9 1227 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 FMR1NBQ8N0W7 255 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 ZC3H12CQ9C0D7 883 aaKnown RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TRPV6Q9H1D0 765 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PIF1Q9H611 641 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 SEL1LQ9UBV2 794 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PCDHGC3Q9UN70 934 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 MTCL1Q9Y4B5 1905 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 TLDC2A0PJX2 215 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L5A8MUK1 530 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 PRC1O43663 620 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 CD2BP2O95400 341 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 LCA5LO95447 670 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 ABL1P00519 1130 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 HLA-DOAP06340 250 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 MAPK1P28482 360 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 RPL34P49207 117 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 SART3Q15020 963 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 CFAP100Q494V2 611 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 POTEEQ6S8J3 1075 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 SLC4A10Q6U841 1118 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 SCML4Q8N228 414 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 LINC00301Q8NCQ3 95 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 HLA-CQ95604 372 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 INPP4AQ96PE3 977 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 TSEN34Q9BSV6 310 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 CEP131Q9UPN4 1083 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 MYH9P35579 1960 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 GTPBP10A4D1E9 387 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 RCCD1A6NED2 376 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 SOBPA7XYQ1 873 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 CYTH3O43739 400 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 CYP7A1P22680 504 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 GUCA2AQ02747 115 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 PDXDC2PQ6P474 469 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 HELBQ8NG08 1087 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 NOC3LQ8WTT2 800 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 MS4A3Q96HJ5 214 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 TMEM47Q9BQJ4 181 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 IRX2Q9BZI1 471 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 LRRC27Q9C0I9 530 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 CNTN6Q9UQ52 1028 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 SCAMP3O14828 347 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 STRNO43815 780 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 SCG2P13521 617 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 PTPRAP18433 802 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 GUCY2CP25092 1073 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 PRDX5P30044 214 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 HIRAP54198 1017 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 TARBP2Q15633 366 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 ILDR2Q71H61 639 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 RTL10Q7L3V2 364 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 FASTKD5Q7L8L6 764 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 UBE2Q1Q7Z7E8 422 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 ERO1BQ86YB8 467 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 NT5DC4Q86YG4 428 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 MCF2L2Q86YR7 1114 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 FAM133AQ8N9E0 248 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 ASB16Q96NS5 453 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 TNMDQ9H2S6 317 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 OLFML3Q9NRN5 406 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 DDX19AQ9NUU7 478 aaKnown RBP5.61□□□□□ -1.51
SCAF11-212ENST00000549162 BOLA1Q9Y3E2 137 aa5.61□□□□□ -1.51
SCAF11-212ENST00000549162 MEIS2O14770 477 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 CA12O43570 354 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 GYG1P46976 350 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 TOB1P50616 345 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 NR6A1Q15406 480 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ZCWPW2Q504Y3 356 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 MFSD14BQ5SR56 506 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF276Q8N554 614 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 NKX2-3Q8TAU0 364 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 AIDAQ96BJ3 306 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 SPACA7Q96KW9 195 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 MXD3Q9BW11 206 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 CCDC8Q9H0W5 538 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 MEIS1O00470 390 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 MAP2K2P36507 400 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms