RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IWS1Q96ST2 819 aa21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 PXMP2Q9NR77 195 aa21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 PDRG1Q9NUG6 133 aa21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 GNEQ9Y223 722 aaKnown RBP21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 V9GY48 417 aaPredicted RBP21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 CCDC196A0A1B0GTZ2 297 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 RBM47A0AV96 593 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 MYADML2A6NDP7 307 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 GJA9P57773 515 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 IRX5P78411 483 aaPredicted RBP21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 TMEM63BQ5T3F8 832 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 FCHSD1Q86WN1 690 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 KLHDC9Q8NEP7 349 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 UPF3AQ9H1J1 476 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 NID2Q14112 1375 aa21.61■■□□□ 1.05
PRPF40B-206ENST00000547764 EVI5O60447 810 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 C6orf222P0C671 652 aaPredicted RBP21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 PTGS1P23219 599 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 HEATR3Q7Z4Q2 680 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 GPKOWQ92917 476 aaPredicted RBP eCLIP21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 FERMT2Q96AC1 680 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 IL17RAQ96F46 866 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 LARP6Q9BRS8 491 aaKnown RBP21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 WDR11Q9BZH6 1224 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 SPC25Q9HBM1 224 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 PHF24Q9UPV7 400 aa21.6■■□□□ 1.05
PRPF40B-206ENST00000547764 NR3C2P08235 984 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 STXBP2Q15833 593 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 LRRC26Q2I0M4 334 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 DUSP28Q4G0W2 176 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 PRPF38BQ5VTL8 546 aaKnown RBP21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 CCSAPQ6IQ19 270 aaPredicted RBP21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 TLK2Q86UE8 772 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 PDCD2LQ9BRP1 358 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 TSEN34Q9BSV6 310 aaKnown RBP21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 ALPK3Q96L96 1907 aa21.59■■□□□ 1.05
PRPF40B-206ENST00000547764 PIK3CDO00329 1044 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 MEIS2O14770 477 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 CTAGE5O15320 804 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 DYNC1LI2O43237 492 aaPredicted RBP21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 CST5P28325 142 aaPredicted RBP21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 ATN1P54259 1190 aaPredicted RBP21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 NKX3-2P78367 333 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 CCT2P78371 535 aaKnown RBP21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 KCNA10Q16322 511 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 USP17L6PQ6QN14 398 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 SCFD2Q8WU76 684 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 PSTPIP2Q9H939 334 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 Q9Y3F1 56 aa21.58■■□□□ 1.05
PRPF40B-206ENST00000547764 H0YGN5 161 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 EIF3JO75822 258 aaKnown RBP21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 ACLYP53396 1101 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 PGM5Q15124 567 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 GNASQ5JWF2 1037 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 SEPT14Q6ZU15 432 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 SMARCC2Q8TAQ2 1214 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 CUL5Q93034 780 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 ZNF274Q96GC6 653 aaPredicted RBP21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 AP5M1Q9H0R1 490 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 NCOA5Q9HCD5 579 aaKnown RBP21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 NR2E3Q9Y5X4 410 aa21.57■■□□□ 1.04
PRPF40B-206ENST00000547764 MOXD2PA6NHM9 499 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 MYCLP12524 364 aaPredicted RBP21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 BEX3Q00994 111 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 NTRK3Q16288 839 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 TYW1BQ6NUM6 668 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 SLC39A5Q6ZMH5 540 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 VSIG10LQ86VR7 867 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 C7orf61Q8IZ16 206 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 PCSK9Q8NBP7 692 aaKnown RBP21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 IL31RAQ8NI17 732 aa21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 ALDH8A1Q9H2A2 487 aaPredicted RBP21.56■■□□□ 1.04
PRPF40B-206ENST00000547764 A0A1W2PQ45 241 aaPredicted RBP21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 A0A1W2PQY0 241 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 ARIH2O95376 493 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 TXNP10599 105 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 NAPAP54920 295 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 TTLL4Q14679 1199 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 FSCN1Q16658 493 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 PHKBQ93100 1093 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 DNAH12Q6ZR08 3092 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 FRMPD4Q14CM0 1322 aa21.55■■□□□ 1.04
PRPF40B-206ENST00000547764 CEP290O15078 2479 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 hCG_1984214I3L0E3 225 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 STXBP3O00186 592 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 NKRFO15226 690 aaKnown RBP eCLIP21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 PRPF3O43395 683 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 ASGR1P07306 291 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 PFKFB3Q16875 520 aaPredicted RBP21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 CCDC62Q6P9F0 684 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 ZNF713Q8N859 430 aaPredicted RBP21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 COPS5Q92905 334 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 BARHL2Q9NY43 387 aa21.54■■□□□ 1.04
PRPF40B-206ENST00000547764 PPFIA3O75145 1194 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 RGS20O76081 388 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 SCG2P13521 617 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 IFNAR1P17181 557 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 CCND2P30279 289 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms