RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ESYT2A0FGR8 921 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 MEIS2O14770 477 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 AKR1A1P14550 325 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 LHX8Q68G74 356 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 FCHSD1Q86WN1 690 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 NECAB1Q8N987 351 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 RIC8AQ9NPQ8 531 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 PXMP2Q9NR77 195 aa19.33■□□□□ 0.68
CCDC38-203ENST00000546803 SH2B1Q9NRF2 756 aaPredicted RBP19.33■□□□□ 0.68
CCDC38-203ENST00000546803 STK36Q9NRP7 1315 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 SMCO2A6NFE2 343 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 CAPN15O75808 1086 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 LARGE1O95461 756 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 TFRCP02786 760 aaKnown RBP19.32■□□□□ 0.68
CCDC38-203ENST00000546803 MCM2P49736 904 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 TYW1BQ6NUM6 668 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 USP17L6PQ6QN14 398 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 FAM177A1Q8N128 213 aaPredicted RBP19.32■□□□□ 0.68
CCDC38-203ENST00000546803 CCDC148Q8NFR7 591 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 PDCD2LQ9BRP1 358 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 SH3GLB2Q9NR46 395 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 OGDHLQ9ULD0 1010 aa19.32■□□□□ 0.68
CCDC38-203ENST00000546803 PPFIA3O75145 1194 aa19.31■□□□□ 0.68
CCDC38-203ENST00000546803 NR3C2P08235 984 aa19.31■□□□□ 0.68
CCDC38-203ENST00000546803 EIF2AK2P19525 551 aaKnown RBP19.31■□□□□ 0.68
CCDC38-203ENST00000546803 EN2P19622 333 aaPredicted RBP19.31■□□□□ 0.68
CCDC38-203ENST00000546803 ADCY7P51828 1080 aa19.31■□□□□ 0.68
CCDC38-203ENST00000546803 STXBP2Q15833 593 aa19.31■□□□□ 0.68
CCDC38-203ENST00000546803 ZMYND12Q9H0C1 365 aa19.31■□□□□ 0.68
CCDC38-203ENST00000546803 CTDNEP1O95476 244 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 RARBP10826 455 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 GNA11P29992 359 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 CCDC144BQ3MJ40 725 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 IQSEC1Q6DN90 963 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 EEPD1Q7L9B9 569 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 FBXO16Q8IX29 292 aaPredicted RBP19.3■□□□□ 0.68
CCDC38-203ENST00000546803 ANKLE1Q8NAG6 615 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 C6orf50Q9HD87 102 aa19.3■□□□□ 0.68
CCDC38-203ENST00000546803 DDX49Q9Y6V7 483 aaKnown RBP19.3■□□□□ 0.68
CCDC38-203ENST00000546803 FRMPD4Q14CM0 1322 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 SPDYE3A6NKU9 549 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 EIF3JO75822 258 aaKnown RBP19.29■□□□□ 0.68
CCDC38-203ENST00000546803 FOSP01100 380 aaPredicted RBP19.29■□□□□ 0.68
CCDC38-203ENST00000546803 PGM5Q15124 567 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 MCTP2Q6DN12 878 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 TAPT1Q6NXT6 567 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 VSIG10LQ86VR7 867 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 WASF1Q92558 559 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 SHISA4Q96DD7 197 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 EHMT1Q9H9B1 1298 aa19.29■□□□□ 0.68
CCDC38-203ENST00000546803 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
CCDC38-203ENST00000546803 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
CCDC38-203ENST00000546803 RBM47A0AV96 593 aaKnown RBP19.28■□□□□ 0.68
CCDC38-203ENST00000546803 DUSP11O75319 330 aaKnown RBP19.28■□□□□ 0.68
CCDC38-203ENST00000546803 STAM2O75886 525 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 XBP1P17861 261 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 CCND2P30279 289 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 RGS19P49795 217 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 TNFAIP2Q03169 654 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 AP3B2Q13367 1082 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 UBE2SQ16763 222 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 XRRA1Q6P2D8 792 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 ARRDC4Q8NCT1 418 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 NSUN7Q8NE18 718 aaKnown RBP19.28■□□□□ 0.68
CCDC38-203ENST00000546803 BICD2Q8TD16 824 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 LLPHQ9BRT6 129 aaKnown RBP19.28■□□□□ 0.68
CCDC38-203ENST00000546803 VPS54Q9P1Q0 977 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 PCDHA6Q9UN73 950 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 PCDHA8Q9Y5H6 950 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 HTTP42858 3142 aa19.28■□□□□ 0.68
CCDC38-203ENST00000546803 SMCHD1A6NHR9 2005 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
CCDC38-203ENST00000546803 NLRP5P59047 1200 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 ST3GAL1Q11201 340 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 ANO1Q5XXA6 986 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 GALNT17Q6IS24 598 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 CCDC83Q8IWF9 413 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 XPNPEP3Q9NQH7 507 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 PDGFCQ9NRA1 345 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 Q9Y3F1 56 aa19.27■□□□□ 0.68
CCDC38-203ENST00000546803 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.67
CCDC38-203ENST00000546803 ADCYAP1R1P41586 468 aa19.26■□□□□ 0.67
CCDC38-203ENST00000546803 CLK2P49760 499 aaKnown RBP19.26■□□□□ 0.67
CCDC38-203ENST00000546803 PCNX4Q63HM2 1172 aa19.26■□□□□ 0.67
CCDC38-203ENST00000546803 IL31RAQ8NI17 732 aa19.26■□□□□ 0.67
CCDC38-203ENST00000546803 WDR11Q9BZH6 1224 aa19.26■□□□□ 0.67
CCDC38-203ENST00000546803 SPC25Q9HBM1 224 aa19.26■□□□□ 0.67
CCDC38-203ENST00000546803 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.25■□□□□ 0.67
CCDC38-203ENST00000546803 NKRFO15226 690 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC38-203ENST00000546803 FARP2O94887 1054 aaPredicted RBP19.25■□□□□ 0.67
CCDC38-203ENST00000546803 FDPSP14324 419 aaKnown RBP19.25■□□□□ 0.67
CCDC38-203ENST00000546803 SMPD1P17405 629 aa19.25■□□□□ 0.67
CCDC38-203ENST00000546803 TTLL4Q14679 1199 aa19.25■□□□□ 0.67
CCDC38-203ENST00000546803 DUSP28Q4G0W2 176 aa19.25■□□□□ 0.67
CCDC38-203ENST00000546803 RNF180Q86T96 592 aa19.25■□□□□ 0.67
CCDC38-203ENST00000546803 REXO1Q8N1G1 1221 aaKnown RBP19.25■□□□□ 0.67
CCDC38-203ENST00000546803 GNEQ9Y223 722 aaKnown RBP19.25■□□□□ 0.67
CCDC38-203ENST00000546803 DNM1LO00429 736 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms