RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.88■■□□□ 1.41
SCARB1-211ENST00000546215 CYBAP13498 195 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 ADCY7P51828 1080 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 PRAMEF19Q5SWL8 479 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 TRPV1Q8NER1 839 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 CCDC148Q8NFR7 591 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 GLT8D2Q9H1C3 349 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 RPTORQ8N122 1335 aa23.87■■□□□ 1.41
SCARB1-211ENST00000546215 MYCP01106 439 aaPredicted RBP23.86■■□□□ 1.41
SCARB1-211ENST00000546215 ARHGEF16Q5VV41 709 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 WASF1Q92558 559 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 UNC93B1Q9H1C4 597 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 NRBP1Q9UHY1 535 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 ADAMTS3O15072 1205 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 CCL5P13501 91 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 CLK2P49760 499 aaKnown RBP23.86■■□□□ 1.41
SCARB1-211ENST00000546215 FAM177A1Q8N128 213 aaPredicted RBP23.86■■□□□ 1.41
SCARB1-211ENST00000546215 SNX21Q969T3 373 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 IWS1Q96ST2 819 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 ALG1Q9BT22 464 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 KATNBL1Q9H079 304 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 C6orf50Q9HD87 102 aa23.86■■□□□ 1.41
SCARB1-211ENST00000546215 HMX1Q9NP08 348 aaPredicted RBP23.86■■□□□ 1.41
SCARB1-211ENST00000546215 ZNF865P0CJ78 1059 aaPredicted RBP23.85■■□□□ 1.41
SCARB1-211ENST00000546215 EIF2AK2P19525 551 aaKnown RBP23.85■■□□□ 1.41
SCARB1-211ENST00000546215 GNA11P29992 359 aa23.85■■□□□ 1.41
SCARB1-211ENST00000546215 CCND3P30281 292 aaPredicted RBP23.85■■□□□ 1.41
SCARB1-211ENST00000546215 PDCD2LQ9BRP1 358 aa23.85■■□□□ 1.41
SCARB1-211ENST00000546215 ABHD16BQ9H3Z7 469 aa23.85■■□□□ 1.41
SCARB1-211ENST00000546215 GJB4Q9NTQ9 266 aa23.85■■□□□ 1.41
SCARB1-211ENST00000546215 CNPY2Q9Y2B0 182 aa23.85■■□□□ 1.41
SCARB1-211ENST00000546215 FRMPD4Q14CM0 1322 aa23.84■■□□□ 1.41
SCARB1-211ENST00000546215 B4DLN1 442 aa23.84■■□□□ 1.41
SCARB1-211ENST00000546215 NLRP5P59047 1200 aa23.84■■□□□ 1.41
SCARB1-211ENST00000546215 HMGN5P82970 282 aaKnown RBP23.84■■□□□ 1.41
SCARB1-211ENST00000546215 ACVR2BQ13705 512 aa23.84■■□□□ 1.41
SCARB1-211ENST00000546215 MPHOSPH6Q99547 160 aaKnown RBP23.84■■□□□ 1.41
SCARB1-211ENST00000546215 NR3C2P08235 984 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 CUL4AQ13619 759 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 PGM5Q15124 567 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 NPY5RQ15761 445 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 RNF208Q9H0X6 261 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 PAK6Q9NQU5 681 aaPredicted RBP23.83■■□□□ 1.41
SCARB1-211ENST00000546215 PCDHA6Q9UN73 950 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 KCNJ14Q9UNX9 436 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 PCDHA8Q9Y5H6 950 aa23.83■■□□□ 1.41
SCARB1-211ENST00000546215 KIAA0100Q14667 2235 aaKnown RBP23.83■■□□□ 1.41
SCARB1-211ENST00000546215 XBP1P17861 261 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 PDE4DQ08499 809 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 EEPD1Q7L9B9 569 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 IL31RAQ8NI17 732 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 BICD2Q8TD16 824 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 PHF20Q9BVI0 1012 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.82■■□□□ 1.41e-9■■■■□ 21
SCARB1-211ENST00000546215 LRRC37A2A6NM11 1700 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 SPDYE3A6NKU9 549 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 VSIG10LQ86VR7 867 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 FBXO16Q8IX29 292 aaPredicted RBP23.82■■□□□ 1.4
SCARB1-211ENST00000546215 VTA1Q9NP79 307 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 TMEM260Q9NX78 707 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 ZHX1Q9UKY1 873 aaPredicted RBP23.82■■□□□ 1.4
SCARB1-211ENST00000546215 PCDHA4Q9UN74 947 aa23.82■■□□□ 1.4
SCARB1-211ENST00000546215 K7ELQ4 463 aaPredicted RBP23.81■■□□□ 1.4
SCARB1-211ENST00000546215 SEPT4O43236 478 aa23.81■■□□□ 1.4
SCARB1-211ENST00000546215 FOSP01100 380 aaPredicted RBP23.81■■□□□ 1.4
SCARB1-211ENST00000546215 AP3B2Q13367 1082 aa23.81■■□□□ 1.4
SCARB1-211ENST00000546215 STXBP2Q15833 593 aa23.81■■□□□ 1.4
SCARB1-211ENST00000546215 JAKMIP3Q5VZ66 844 aa23.81■■□□□ 1.4
SCARB1-211ENST00000546215 GALNT17Q6IS24 598 aa23.81■■□□□ 1.4
SCARB1-211ENST00000546215 TAPT1Q6NXT6 567 aa23.81■■□□□ 1.4
SCARB1-211ENST00000546215 REXO1Q8N1G1 1221 aaKnown RBP23.81■■□□□ 1.4
SCARB1-211ENST00000546215 CNGA1P29973 690 aa23.8■■□□□ 1.4
SCARB1-211ENST00000546215 DAGLBQ8NCG7 672 aa23.8■■□□□ 1.4
SCARB1-211ENST00000546215 PGBD1Q96JS3 809 aa23.8■■□□□ 1.4
SCARB1-211ENST00000546215 M0R2N6 131 aa23.79■■□□□ 1.4
SCARB1-211ENST00000546215 EIF3JO75822 258 aaKnown RBP23.79■■□□□ 1.4
SCARB1-211ENST00000546215 MYCLP12524 364 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-211ENST00000546215 CCDC144BQ3MJ40 725 aa23.79■■□□□ 1.4
SCARB1-211ENST00000546215 BLIDQ8IZY5 108 aa23.79■■□□□ 1.4
SCARB1-211ENST00000546215 RASGRP4Q8TDF6 673 aa23.79■■□□□ 1.4
SCARB1-211ENST00000546215 ANO3Q9BYT9 981 aa23.79■■□□□ 1.4
SCARB1-211ENST00000546215 PDGFCQ9NRA1 345 aa23.79■■□□□ 1.4
SCARB1-211ENST00000546215 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-211ENST00000546215 GJB1P08034 283 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 CCND2P30279 289 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 MRPS9P82933 396 aaKnown RBP23.78■■□□□ 1.4
SCARB1-211ENST00000546215 LHX8Q68G74 356 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 MCTP2Q6DN12 878 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 FAM184AQ8NB25 1140 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 DDX20Q9UHI6 824 aaKnown RBP23.78■■□□□ 1.4
SCARB1-211ENST00000546215 AKR1A1P14550 325 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 PCNX4Q63HM2 1172 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 DEFB118Q96PH6 123 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 TMEM106CQ9BVX2 250 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 FAM184BQ9ULE4 1060 aa23.78■■□□□ 1.4
SCARB1-211ENST00000546215 RBM47A0AV96 593 aaKnown RBP23.77■■□□□ 1.4
SCARB1-211ENST00000546215 ADCY6O43306 1168 aa23.77■■□□□ 1.4
SCARB1-211ENST00000546215 RGS20O76081 388 aa23.77■■□□□ 1.4
SCARB1-211ENST00000546215 FOSBP53539 338 aa23.77■■□□□ 1.4
SCARB1-211ENST00000546215 KRT40Q6A162 431 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms