RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HMX1Q9NP08 348 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-211ENST00000545998 SH3GLB2Q9NR46 395 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 PXMP2Q9NR77 195 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-211ENST00000545998 VPS54Q9P1Q0 977 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 ORC3Q9UBD5 711 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-211ENST00000545998 ESYT2A0FGR8 921 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 CCND3P30281 292 aaPredicted RBP23.53■■□□□ 1.36
HMGA2-211ENST00000545998 MKI67P46013 3256 aaKnown RBP23.53■■□□□ 1.36
HMGA2-211ENST00000545998 ADCY7P51828 1080 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 UBE2SQ16763 222 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 FCHSD1Q86WN1 690 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 SMARCC2Q8TAQ2 1214 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 ZMYND12Q9H0C1 365 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 CNPY2Q9Y2B0 182 aa23.53■■□□□ 1.36
HMGA2-211ENST00000545998 MRPL12P52815 198 aaKnown RBP23.52■■□□□ 1.36
HMGA2-211ENST00000545998 ARHGEF16Q5VV41 709 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 IWS1Q96ST2 819 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 KATNBL1Q9H079 304 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 RNF208Q9H0X6 261 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 GLT8D2Q9H1C3 349 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 PAK6Q9NQU5 681 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-211ENST00000545998 FRMPD4Q14CM0 1322 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 ZNF865P0CJ78 1059 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-211ENST00000545998 EIF2AK2P19525 551 aaKnown RBP23.52■■□□□ 1.36
HMGA2-211ENST00000545998 CCDC148Q8NFR7 591 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.52■■□□□ 1.36
HMGA2-211ENST00000545998 ABHD16BQ9H3Z7 469 aa23.52■■□□□ 1.36
HMGA2-211ENST00000545998 ACVR2BQ13705 512 aa23.51■■□□□ 1.35
HMGA2-211ENST00000545998 FAM177A1Q8N128 213 aaPredicted RBP23.51■■□□□ 1.35
HMGA2-211ENST00000545998 WASF1Q92558 559 aa23.51■■□□□ 1.35
HMGA2-211ENST00000545998 MPHOSPH6Q99547 160 aaKnown RBP23.51■■□□□ 1.35
HMGA2-211ENST00000545998 KIAA1217Q5T5P2 1943 aa23.5■■□□□ 1.35
HMGA2-211ENST00000545998 B4DLN1 442 aa23.5■■□□□ 1.35
HMGA2-211ENST00000545998 CLK2P49760 499 aaKnown RBP23.5■■□□□ 1.35
HMGA2-211ENST00000545998 PDCD2LQ9BRP1 358 aa23.5■■□□□ 1.35
HMGA2-211ENST00000545998 C6orf50Q9HD87 102 aa23.5■■□□□ 1.35
HMGA2-211ENST00000545998 FRMPD3Q5JV73 1810 aa23.49■■□□□ 1.35
HMGA2-211ENST00000545998 ADAMTS3O15072 1205 aa23.49■■□□□ 1.35
HMGA2-211ENST00000545998 GNA11P29992 359 aa23.49■■□□□ 1.35
HMGA2-211ENST00000545998 PDE4DQ08499 809 aa23.49■■□□□ 1.35
HMGA2-211ENST00000545998 PGM5Q15124 567 aa23.49■■□□□ 1.35
HMGA2-211ENST00000545998 ALG1Q9BT22 464 aa23.49■■□□□ 1.35
HMGA2-211ENST00000545998 SEPT4O43236 478 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 NR3C2P08235 984 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 CNGA1P29973 690 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 FBXO16Q8IX29 292 aaPredicted RBP23.48■■□□□ 1.35
HMGA2-211ENST00000545998 TMEM106CQ9BVX2 250 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 VTA1Q9NP79 307 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 ZHX1Q9UKY1 873 aaPredicted RBP23.48■■□□□ 1.35
HMGA2-211ENST00000545998 CCDC85CA6NKD9 419 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 SPDYE3A6NKU9 549 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 GJB1P08034 283 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 NLRP5P59047 1200 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 EEPD1Q7L9B9 569 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 IL31RAQ8NI17 732 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 BICD2Q8TD16 824 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 PCDHA6Q9UN73 950 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 PCDHA8Q9Y5H6 950 aa23.48■■□□□ 1.35
HMGA2-211ENST00000545998 HMGN5P82970 282 aaKnown RBP23.47■■□□□ 1.35
HMGA2-211ENST00000545998 STXBP2Q15833 593 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 LHX8Q68G74 356 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 TAPT1Q6NXT6 567 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 VSIG10LQ86VR7 867 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 PHF20Q9BVI0 1012 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 GJB4Q9NTQ9 266 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 TMEM260Q9NX78 707 aa23.47■■□□□ 1.35
HMGA2-211ENST00000545998 DDX20Q9UHI6 824 aaKnown RBP23.47■■□□□ 1.35
HMGA2-211ENST00000545998 FOSP01100 380 aaPredicted RBP23.46■■□□□ 1.35
HMGA2-211ENST00000545998 XBP1P17861 261 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 AP3B2Q13367 1082 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 NPY5RQ15761 445 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 CCDC144BQ3MJ40 725 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 REXO1Q8N1G1 1221 aaKnown RBP23.46■■□□□ 1.35
HMGA2-211ENST00000545998 SNX21Q969T3 373 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 DEFB118Q96PH6 123 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 KCNJ14Q9UNX9 436 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 DNAH12Q6ZR08 3092 aa23.46■■□□□ 1.35
HMGA2-211ENST00000545998 MSCO60682 206 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 EIF3JO75822 258 aaKnown RBP23.45■■□□□ 1.34
HMGA2-211ENST00000545998 AKR1A1P14550 325 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 GALNT17Q6IS24 598 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 DAGLBQ8NCG7 672 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 PDGFCQ9NRA1 345 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 FAM184BQ9ULE4 1060 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 PCDHA4Q9UN74 947 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 MYH7BA7E2Y1 1941 aa23.45■■□□□ 1.34
HMGA2-211ENST00000545998 RBM47A0AV96 593 aaKnown RBP23.44■■□□□ 1.34
HMGA2-211ENST00000545998 POTEFA5A3E0 1075 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 SGPL1O95470 568 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 MYCLP12524 364 aaPredicted RBP23.44■■□□□ 1.34
HMGA2-211ENST00000545998 CCND2P30279 289 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 GJA8P48165 433 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 CUL4AQ13619 759 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 JAKMIP3Q5VZ66 844 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 U2AF1L4Q8WU68 220 aaKnown RBP23.44■■□□□ 1.34
HMGA2-211ENST00000545998 PGBD1Q96JS3 809 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 MRPS9P82933 396 aaKnown RBP23.44■■□□□ 1.34
HMGA2-211ENST00000545998 PCNX4Q63HM2 1172 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 MCTP2Q6DN12 878 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms