RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PIGSQ96S52 555 aa13.67□□□□□ -0.22
HDAC4-216ENST00000544989 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
HDAC4-216ENST00000544989 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-216ENST00000544989 WDR11Q9BZH6 1224 aa13.67□□□□□ -0.22
HDAC4-216ENST00000544989 RBM28Q9NW13 759 aaKnown RBP13.67□□□□□ -0.22
HDAC4-216ENST00000544989 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-216ENST00000544989 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-216ENST00000544989 DCDC2CA8MYV0 355 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-216ENST00000544989 ASGR1P07306 291 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 SMPD1P17405 629 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 HSPA4P34932 840 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 CPT1AP50416 773 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 FGD1P98174 961 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
HDAC4-216ENST00000544989 TTLL4Q14679 1199 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 VTI1AQ96AJ9 217 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 PURBQ96QR8 312 aaKnown RBP13.66□□□□□ -0.22
HDAC4-216ENST00000544989 GDF15Q99988 308 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 MUC3AQ02505 3323 aa13.66□□□□□ -0.22
HDAC4-216ENST00000544989 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-216ENST00000544989 ADCY6O43306 1168 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 CYTH3O43739 400 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 KPNA6O60684 536 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.22
HDAC4-216ENST00000544989 MAGEA10P43363 369 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-216ENST00000544989 TRIM60Q495X7 471 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 CUL5Q93034 780 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 MYL10Q9BUA6 226 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 PXMP2Q9NR77 195 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 TTC28Q96AY4 2481 aa13.65□□□□□ -0.22
HDAC4-216ENST00000544989 LCTP09848 1927 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 CCDC196A0A1B0GTZ2 297 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 TLR3O15455 904 aaKnown RBP13.64□□□□□ -0.23
HDAC4-216ENST00000544989 ZBTB43O43298 467 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 PPP1R11O60927 126 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-216ENST00000544989 NR3C2P08235 984 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 CLTBP09497 229 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 SYN1P17600 705 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 BLOC1S2Q6QNY1 142 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 MICU3Q86XE3 530 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 LRRC2Q9BYS8 371 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-216ENST00000544989 EYSQ5T1H1 3165 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
HDAC4-216ENST00000544989 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
HDAC4-216ENST00000544989 PRUNE2Q8WUY3 3088 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 MYADML2A6NDP7 307 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 ARVCFO00192 962 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 OPLAHO14841 1288 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 CTAGE5O15320 804 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 STAM2O75886 525 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 TXNP10599 105 aaKnown RBP13.63□□□□□ -0.23
HDAC4-216ENST00000544989 TLE2Q04725 743 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
HDAC4-216ENST00000544989 ZNF713Q8N859 430 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-216ENST00000544989 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 TBC1D5Q92609 795 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
HDAC4-216ENST00000544989 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
HDAC4-216ENST00000544989 PRDM5Q9NQX1 630 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-216ENST00000544989 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
HDAC4-216ENST00000544989 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 SOX1O00570 391 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-216ENST00000544989 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
HDAC4-216ENST00000544989 EIF2AK2P19525 551 aaKnown RBP13.62□□□□□ -0.23
HDAC4-216ENST00000544989 CCND2P30279 289 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 BEX3Q00994 111 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 RTN1Q16799 776 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 PDCD2LQ9BRP1 358 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 TMEM39AQ9NV64 488 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 COL20A1Q9P218 1284 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 SNX14Q9Y5W7 946 aa13.62□□□□□ -0.23
HDAC4-216ENST00000544989 A6NJR5 290 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 GOLGA8AA7E2F4 631 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 GH1P01241 217 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 TGFB3P10600 412 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 HOXA13P31271 388 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-216ENST00000544989 CDK7P50613 346 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 GNPTABQ3T906 1256 aa13.61□□□□□ -0.23
HDAC4-216ENST00000544989 SEPT14Q6ZU15 432 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms