RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 RIC8AQ9NPQ8 531 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 PXMP2Q9NR77 195 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 VPS54Q9P1Q0 977 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 NRBP1Q9UHY1 535 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 CNPY2Q9Y2B0 182 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 KIAA1217Q5T5P2 1943 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 JAK2O60674 1132 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 GJB1P08034 283 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
CD9-210ENST00000543916 ADCY7P51828 1080 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 ARHGEF16Q5VV41 709 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 FBXO16Q8IX29 292 aaPredicted RBP17.35■□□□□ 0.37
CD9-210ENST00000543916 IL31RAQ8NI17 732 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
CD9-210ENST00000543916 CUL5Q93034 780 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 TMEM106CQ9BVX2 250 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 ABHD16BQ9H3Z7 469 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
CD9-210ENST00000543916 ZHX1Q9UKY1 873 aaPredicted RBP17.35■□□□□ 0.37
CD9-210ENST00000543916 FRMPD4Q14CM0 1322 aa17.35■□□□□ 0.37
CD9-210ENST00000543916 ESYT2A0FGR8 921 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 SEPT4O43236 478 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 BRCA2P51587 3418 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 PDE4DQ08499 809 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 LHX8Q68G74 356 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 EEPD1Q7L9B9 569 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 PDCD2LQ9BRP1 358 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
CD9-210ENST00000543916 ORC3Q9UBD5 711 aaPredicted RBP17.34■□□□□ 0.37
CD9-210ENST00000543916 ADCY6O43306 1168 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 GJA8P48165 433 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 CLK2P49760 499 aaKnown RBP17.33■□□□□ 0.36
CD9-210ENST00000543916 MRPL12P52815 198 aaKnown RBP17.33■□□□□ 0.36
CD9-210ENST00000543916 PGM5Q15124 567 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 ANO1Q5XXA6 986 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 TAPT1Q6NXT6 567 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 U2AF1L4Q8WU68 220 aaKnown RBP17.33■□□□□ 0.36
CD9-210ENST00000543916 CCDC12Q8WUD4 166 aaPredicted RBP17.33■□□□□ 0.36
CD9-210ENST00000543916 LENG1Q96BZ8 264 aaPredicted RBP17.33■□□□□ 0.36
CD9-210ENST00000543916 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 IWS1Q96ST2 819 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 VTA1Q9NP79 307 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 SH3GLB2Q9NR46 395 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 PDGFCQ9NRA1 345 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 TMEM260Q9NX78 707 aa17.33■□□□□ 0.36
CD9-210ENST00000543916 DDX20Q9UHI6 824 aaKnown RBP17.33■□□□□ 0.36
CD9-210ENST00000543916 B4DLN1 442 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 CAPN15O75808 1086 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 SGPL1O95470 568 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 NR3C2P08235 984 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 EN2P19622 333 aaPredicted RBP17.32■□□□□ 0.36
CD9-210ENST00000543916 MCM2P49736 904 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 CCDC144BQ3MJ40 725 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 MPHOSPH6Q99547 160 aaKnown RBP17.32■□□□□ 0.36
CD9-210ENST00000543916 C6orf50Q9HD87 102 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
CD9-210ENST00000543916 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.31■□□□□ 0.36
CD9-210ENST00000543916 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
CD9-210ENST00000543916 AKR1A1P14550 325 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 ADCYAP1R1P41586 468 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 STXBP2Q15833 593 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 TMEM63BQ5T3F8 832 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
CD9-210ENST00000543916 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 LLPHQ9BRT6 129 aaKnown RBP17.31■□□□□ 0.36
CD9-210ENST00000543916 ALG1Q9BT22 464 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 CRISPLD2Q9H0B8 497 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 GLT8D2Q9H1C3 349 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 FAM184BQ9ULE4 1060 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
CD9-210ENST00000543916 SPDYE3A6NKU9 549 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 MSCO60682 206 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 CCND2P30279 289 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 NLRP5P59047 1200 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 NPY5RQ15761 445 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 VSIG10LQ86VR7 867 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 OGDHLQ9ULD0 1010 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 KCNJ14Q9UNX9 436 aa17.3■□□□□ 0.36
CD9-210ENST00000543916 MYH7BA7E2Y1 1941 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 RBM47A0AV96 593 aaKnown RBP17.29■□□□□ 0.36
CD9-210ENST00000543916 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
CD9-210ENST00000543916 RGS20O76081 388 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 TFRCP02786 760 aaKnown RBP17.29■□□□□ 0.36
CD9-210ENST00000543916 PTGS1P23219 599 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 GNA11P29992 359 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 MRPS9P82933 396 aaKnown RBP17.29■□□□□ 0.36
CD9-210ENST00000543916 JAKMIP3Q5VZ66 844 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 REXO1Q8N1G1 1221 aaKnown RBP17.29■□□□□ 0.36
CD9-210ENST00000543916 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 WASF1Q92558 559 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms