RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IFRD2Q12894 506 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 SPECC1LQ69YQ0 1117 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 CYP26C1Q6V0L0 522 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 STMN4Q9H169 189 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM207AQ9NSI2 230 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 MRGBPQ9NV56 204 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 MROH7-TTC4A0A0A0MT08 1334 aa7.58□□□□□ -1.2
SRGAP1-206ENST00000543397 PNMA6FA0A0J9YX94 578 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 NBPF26B4DH59 902 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 SLC15A2Q16348 729 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 NBPF10Q6P3W6 841 aaKnown RBP7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 MICALL2Q8IY33 904 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 NBPF15Q8N660 670 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 GJA10Q969M2 543 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 PGBD1Q96JS3 809 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 MIS12Q9H081 205 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 FOXP1Q9H334 677 aaPredicted RBP7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 NLRC4Q9NPP4 1024 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 TTLL3Q9Y4R7 772 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 VAV2P52735 878 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 ADCK5Q3MIX3 580 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 SFMBT2Q5VUG0 894 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 RAB3IL1Q8TBN0 382 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 DCAF4Q8WV16 495 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 NLRP7Q8WX94 980 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 RMI1Q9H9A7 625 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 MAGEA1P43355 309 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 ZNF131P52739 623 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 GABPAQ06546 454 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 PNOCQ13519 176 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 SEPT2Q15019 361 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 SMIM5Q71RC9 77 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 RASEFQ8IZ41 740 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 AK8Q96MA6 479 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 MAGEF1Q9HAY2 307 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 CNOT7Q9UIV1 285 aaKnown RBP7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 CEP152O94986 1710 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 GTPBP6O43824 516 aaPredicted RBP7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 PSAPP07602 524 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 IFNAR1P17181 557 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 LIFRP42702 1097 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 MTERF2Q49AM1 385 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM83BQ5T0W9 1011 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 SNRNP48Q6IEG0 339 aaKnown RBP7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 DEFB132Q7Z7B7 95 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 CCDC26Q8TAB7 109 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 IQCDQ96DY2 449 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 HACL1Q9UJ83 578 aa7.57□□□□□ -1.2
SRGAP1-206ENST00000543397 SH2B2O14492 632 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 LACTBP83111 547 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 LARP4BQ92615 738 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 SMAD5Q99717 465 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ZBED2Q9BTP6 218 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 KMT5AQ9NQR1 393 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ARHGEF37A1IGU5 675 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 UTYO14607 1347 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 CMA1P23946 247 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 HOXA13P31271 388 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 MTX1Q13505 466 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 PPP1R21Q6ZMI0 780 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 PPM1KQ8N3J5 372 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 GPR161Q8N6U8 529 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 SLC39A2Q9NP94 309 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 HERC5Q9UII4 1024 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 MKL2Q9ULH7 1088 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 LMTK2Q8IWU2 1503 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ZNF521Q96K83 1311 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ADAM9Q13443 819 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 STXBP2Q15833 593 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 EZH2Q15910 746 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 GBP6Q6ZN66 633 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 TBC1D16Q8TBP0 767 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 SYMPKQ92797 1274 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 CUEDC2Q9H467 287 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ARFGAP3Q9NP61 516 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 FEM1BQ9UK73 627 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 TUBB4BP68371 445 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 NFX1Q12986 1120 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 PTPROQ16827 1216 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 SND1Q7KZF4 910 aaKnown RBP eCLIP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 RRAGAQ7L523 313 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 LINC00116Q8NCU8 138 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 C1orf131Q8NDD1 294 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 RMDN3Q96TC7 470 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 POLR3GO15318 223 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 GNAT1P11488 350 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 GAP43P17677 238 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ABCD1P33897 745 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 METTL23Q86XA0 190 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 TMTC1Q8IUR5 882 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 ATL2Q8NHH9 583 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 IFT81Q8WYA0 676 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM49AQ9H0Q0 323 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms