RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CCDC148Q8NFR7 591 aa19.66■□□□□ 0.74
RABGGTA-203ENST00000543002 MPHOSPH6Q99547 160 aaKnown RBP19.66■□□□□ 0.74
RABGGTA-203ENST00000543002 UNC93B1Q9H1C4 597 aa19.66■□□□□ 0.74
RABGGTA-203ENST00000543002 HMX1Q9NP08 348 aaPredicted RBP19.66■□□□□ 0.74
RABGGTA-203ENST00000543002 VPS54Q9P1Q0 977 aa19.66■□□□□ 0.74
RABGGTA-203ENST00000543002 CNPY2Q9Y2B0 182 aa19.66■□□□□ 0.74
RABGGTA-203ENST00000543002 MYCP01106 439 aaPredicted RBP19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 PRAMEF19Q5SWL8 479 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 ARHGEF16Q5VV41 709 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 TRPV1Q8NER1 839 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 WASF1Q92558 559 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 SHISA4Q96DD7 197 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 AIFM3Q96NN9 605 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 IWS1Q96ST2 819 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 ABHD16BQ9H3Z7 469 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 C6orf50Q9HD87 102 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 PXMP2Q9NR77 195 aa19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 DDX49Q9Y6V7 483 aaKnown RBP19.65■□□□□ 0.74
RABGGTA-203ENST00000543002 GNA11P29992 359 aa19.64■□□□□ 0.73
RABGGTA-203ENST00000543002 CCND3P30281 292 aaPredicted RBP19.64■□□□□ 0.73
RABGGTA-203ENST00000543002 UBE2SQ16763 222 aa19.64■□□□□ 0.73
RABGGTA-203ENST00000543002 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.64■□□□□ 0.73
RABGGTA-203ENST00000543002 RNF208Q9H0X6 261 aa19.64■□□□□ 0.73
RABGGTA-203ENST00000543002 MCM3APO60318 1980 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 ZNF865P0CJ78 1059 aaPredicted RBP19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 EIF2AK2P19525 551 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 NLRP5P59047 1200 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 PDE4DQ08499 809 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 ACVR2BQ13705 512 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 FRMPD4Q14CM0 1322 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 PDCD2LQ9BRP1 358 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 KATNBL1Q9H079 304 aa19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 PAK6Q9NQU5 681 aaPredicted RBP19.63■□□□□ 0.73
RABGGTA-203ENST00000543002 NR3C2P08235 984 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 XBP1P17861 261 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 CLK2P49760 499 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 HMGN5P82970 282 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 BICD2Q8TD16 824 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 SNX21Q969T3 373 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 TMEM106CQ9BVX2 250 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 VTA1Q9NP79 307 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 ZHX1Q9UKY1 873 aaPredicted RBP19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 PCDHA6Q9UN73 950 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 PCDHA8Q9Y5H6 950 aa19.62■□□□□ 0.73
RABGGTA-203ENST00000543002 SPDYE3A6NKU9 549 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 SEPT4O43236 478 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 FOSP01100 380 aaPredicted RBP19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 GJB1P08034 283 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 CNGA1P29973 690 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 AP3B2Q13367 1082 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 PGM5Q15124 567 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 STXBP2Q15833 593 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 MCTP2Q6DN12 878 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 GALNT17Q6IS24 598 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 EEPD1Q7L9B9 569 aa19.61■□□□□ 0.73
RABGGTA-203ENST00000543002 CENPFP49454 3210 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 VSIG10LQ86VR7 867 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 FBXO16Q8IX29 292 aaPredicted RBP19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 REXO1Q8N1G1 1221 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 IL31RAQ8NI17 732 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 PHF20Q9BVI0 1012 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 EHMT1Q9H9B1 1298 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 TMEM260Q9NX78 707 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 DDX20Q9UHI6 824 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 FAM184BQ9ULE4 1060 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 PCDHA4Q9UN74 947 aa19.6■□□□□ 0.73
RABGGTA-203ENST00000543002 CCDC85CA6NKD9 419 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 ADAMTS3O15072 1205 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 MSCO60682 206 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 EIF3JO75822 258 aaKnown RBP19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 AKR1A1P14550 325 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 CCND2P30279 289 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 CUL4AQ13619 759 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 NPY5RQ15761 445 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 JAKMIP3Q5VZ66 844 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 TAPT1Q6NXT6 567 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 DAGLBQ8NCG7 672 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 DEFB118Q96PH6 123 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 ANO3Q9BYT9 981 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 GJB4Q9NTQ9 266 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 KCNJ14Q9UNX9 436 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 LRRC37A2A6NM11 1700 aa19.59■□□□□ 0.73
RABGGTA-203ENST00000543002 RBM47A0AV96 593 aaKnown RBP19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 K7ELQ4 463 aaPredicted RBP19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 CCDC144BQ3MJ40 725 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 PCNX4Q63HM2 1172 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 LHX8Q68G74 356 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 XRRA1Q6P2D8 792 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 BLIDQ8IZY5 108 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 FAM184AQ8NB25 1140 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 PDGFCQ9NRA1 345 aa19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.58■□□□□ 0.73
RABGGTA-203ENST00000543002 STAM2O75886 525 aa19.57■□□□□ 0.72
RABGGTA-203ENST00000543002 SGPL1O95470 568 aa19.57■□□□□ 0.72
RABGGTA-203ENST00000543002 GJA8P48165 433 aa19.57■□□□□ 0.72
RABGGTA-203ENST00000543002 IQSEC1Q6DN90 963 aa19.57■□□□□ 0.72
RABGGTA-203ENST00000543002 U2AF1L4Q8WU68 220 aaKnown RBP19.57■□□□□ 0.72
RABGGTA-203ENST00000543002 PGBD1Q96JS3 809 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms