RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 FERMT2Q96AC1 680 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 TM6SF1Q9BZW5 370 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 ZSWIM6Q9HCJ5 1215 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 LRRC37A2A6NM11 1700 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 ALPK3Q96L96 1907 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 ACLYP53396 1101 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 ATN1P54259 1190 aaPredicted RBP23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 KCNA10Q16322 511 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 DUSP28Q4G0W2 176 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 GNASQ5JWF2 1037 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 RUFY3Q7L099 469 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 WDR11Q9BZH6 1224 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 AP5M1Q9H0R1 490 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 PXMP2Q9NR77 195 aa23.2■■□□□ 1.3
CACNA2D4-215ENST00000542340 MYADML2A6NDP7 307 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 GOLGA8AA7E2F4 631 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 GOLGA8BA8MQT2 603 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 CTAGE5O15320 804 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 HOXA13P31271 388 aaPredicted RBP23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 APOBRQ0VD83 1088 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 STXBP2Q15833 593 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 C1orf53Q5VUE5 145 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 SCFD2Q8WU76 684 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 CYP46A1Q9Y6A2 500 aa23.19■■□□□ 1.3
CACNA2D4-215ENST00000542340 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 A0A1W2PQ45 241 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 A0A1W2PQY0 241 aa23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 DYNC1LI2O43237 492 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 NR3C2P08235 984 aa23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 EIF2AK2P19525 551 aaKnown RBP23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 IRX5P78411 483 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 FUT2Q10981 343 aa23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 SNX17Q15036 470 aa23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 FAM217BQ9NTX9 383 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 NAP1L2Q9ULW6 460 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 DNAH12Q6ZR08 3092 aa23.18■■□□□ 1.3
CACNA2D4-215ENST00000542340 NKRFO15226 690 aaKnown RBP eCLIP23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 EIF3JO75822 258 aaKnown RBP23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 ASGR1P07306 291 aa23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 METAP2P50579 478 aaKnown RBP eCLIP23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 EVCP57679 992 aa23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 RTP1P59025 263 aa23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 TMEM63BQ5T3F8 832 aa23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 PDCD2LQ9BRP1 358 aa23.17■■□□□ 1.3
CACNA2D4-215ENST00000542340 CNTNAP5Q8WYK1 1306 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 hCG_1642624A0A1W2PR95 340 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 PIK3CDO00329 1044 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 CDC27P30260 824 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 FSCN1Q16658 493 aaKnown RBP23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 FCHSD1Q86WN1 690 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 GLT1D1Q96MS3 346 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 STARD7Q9NQZ5 370 aa23.16■■□□□ 1.3
CACNA2D4-215ENST00000542340 ELP1O95163 1332 aa23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 ADD1P35611 737 aaKnown RBP23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 ANAPC15P60006 121 aa23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 BEX3Q00994 111 aa23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 TTLL4Q14679 1199 aa23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 VSIG10LQ86VR7 867 aa23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 CUL5Q93034 780 aa23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 V9GY48 417 aaPredicted RBP23.15■■□□□ 1.3
CACNA2D4-215ENST00000542340 NID2Q14112 1375 aa23.14■■□□□ 1.3
CACNA2D4-215ENST00000542340 MEIS2O14770 477 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 ZEB2O60315 1214 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 PTGS1P23219 599 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 PGM5Q15124 567 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 CCDC62Q6P9F0 684 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 SMARCC2Q8TAQ2 1214 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 PSTPIP2Q9H939 334 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 ZMYND8Q9ULU4 1186 aaPredicted RBP23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 ATP11BQ9Y2G3 1177 aa23.14■■□□□ 1.29
CACNA2D4-215ENST00000542340 CABYRO75952 493 aa23.13■■□□□ 1.29
CACNA2D4-215ENST00000542340 TOB2Q14106 344 aaPredicted RBP23.13■■□□□ 1.29
CACNA2D4-215ENST00000542340 TRIM60Q495X7 471 aa23.13■■□□□ 1.29
CACNA2D4-215ENST00000542340 SEPT14Q6ZU15 432 aa23.13■■□□□ 1.29
CACNA2D4-215ENST00000542340 HEATR3Q7Z4Q2 680 aa23.13■■□□□ 1.29
CACNA2D4-215ENST00000542340 UPF3BQ9BZI7 483 aaKnown RBP23.13■■□□□ 1.29
CACNA2D4-215ENST00000542340 FRMPD4Q14CM0 1322 aa23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 hCG_1984214I3L0E3 225 aa23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 ARIH2O95376 493 aa23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 MYCLP12524 364 aaPredicted RBP23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 PDIA3P30101 505 aaKnown RBP23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 USP17L6PQ6QN14 398 aa23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 ZNF713Q8N859 430 aaPredicted RBP23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 OR6J1Q8NGC5 347 aa23.12■■□□□ 1.29
CACNA2D4-215ENST00000542340 SYN1P17600 705 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 CCND2P30279 289 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 CPT1AP50416 773 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 TLE2Q04725 743 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 BRDTQ58F21 947 aaPredicted RBP23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 WWC2Q6AWC2 1192 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 CHRDL2Q6WN34 429 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 TEX2Q8IWB9 1127 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 IL31RAQ8NI17 732 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 GPKOWQ92917 476 aaPredicted RBP eCLIP23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 VTI1AQ96AJ9 217 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 PDRG1Q9NUG6 133 aa23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 COLQQ9Y215 455 aaPredicted RBP23.11■■□□□ 1.29
CACNA2D4-215ENST00000542340 A0A0U1RQG5 324 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms