RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 TRDNQ13061 729 aa16.67■□□□□ 0.26
COPS7A-212ENST00000541866 GRIN2CQ14957 1233 aa16.67■□□□□ 0.26
COPS7A-212ENST00000541866 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
COPS7A-212ENST00000541866 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
COPS7A-212ENST00000541866 NSUN6Q8TEA1 469 aaKnown RBP16.67■□□□□ 0.26
COPS7A-212ENST00000541866 HERVK_113Q902F9 699 aa16.67■□□□□ 0.26
COPS7A-212ENST00000541866 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
COPS7A-212ENST00000541866 MRPL11Q9Y3B7 192 aaKnown RBP16.67■□□□□ 0.26
COPS7A-212ENST00000541866 GRXCR1A8MXD5 290 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 COPS5Q92905 334 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 TAAR1Q96RJ0 339 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 TRMT13Q9NUP7 481 aaKnown RBP16.66■□□□□ 0.26
COPS7A-212ENST00000541866 MSRAQ9UJ68 235 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
COPS7A-212ENST00000541866 PBX2P40425 430 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 RAB30Q15771 203 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-212ENST00000541866 IWS1Q96ST2 819 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
COPS7A-212ENST00000541866 A6NJR5 290 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 CYP2C9P11712 490 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 STXBP2Q15833 593 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 TTC22Q5TAA0 569 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 ARHGEF16Q5VV41 709 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 SCLYQ96I15 445 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 AMNQ9BXJ7 453 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 WNT8AQ9H1J5 351 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-212ENST00000541866 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
COPS7A-212ENST00000541866 LRRC37A2A6NM11 1700 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 ERICH2A1L162 156 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 ZBBXA8MT70 800 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 CFBP00751 764 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 PDE4AP27815 886 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 RETREG2Q8NC44 543 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 GAS2L1Q99501 681 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-212ENST00000541866 SLC4A7Q9Y6M7 1214 aa16.63■□□□□ 0.25
COPS7A-212ENST00000541866 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-212ENST00000541866 LCTP09848 1927 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 ARIH2O95376 493 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 GH1P01241 217 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 PFKMP08237 780 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
COPS7A-212ENST00000541866 PTPN11Q06124 597 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-212ENST00000541866 LY6KQ17RY6 165 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 CCDC62Q6P9F0 684 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 AFG1LQ8WV93 481 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 IL25Q9H293 177 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 COL20A1Q9P218 1284 aa16.62■□□□□ 0.25
COPS7A-212ENST00000541866 CDH23Q9H251 3354 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
COPS7A-212ENST00000541866 EIF3JO75822 258 aaKnown RBP16.61■□□□□ 0.25
COPS7A-212ENST00000541866 EIF2AK2P19525 551 aaKnown RBP16.61■□□□□ 0.25
COPS7A-212ENST00000541866 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
COPS7A-212ENST00000541866 TRAF1Q13077 416 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 BFSP2Q13515 415 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 SEC23AQ15436 765 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 DEFB128Q7Z7B8 93 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
COPS7A-212ENST00000541866 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 PRDM12Q9H4Q4 367 aa16.61■□□□□ 0.25
COPS7A-212ENST00000541866 ZBTB5O15062 677 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 NR3C2P08235 984 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 ACTN1P12814 892 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 COL9A1P20849 921 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 CHMLP26374 656 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
COPS7A-212ENST00000541866 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
COPS7A-212ENST00000541866 NKX2-4Q9H2Z4 354 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
COPS7A-212ENST00000541866 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 EYSQ5T1H1 3165 aa16.6■□□□□ 0.25
COPS7A-212ENST00000541866 PALM3A6NDB9 673 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-212ENST00000541866 CYP21A2P08686 494 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 MYCLP12524 364 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-212ENST00000541866 RFC2P35250 354 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-212ENST00000541866 PTH1RQ03431 593 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 ARHGAP1Q07960 439 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 WTAPQ15007 396 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 HOMER1Q86YM7 354 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms