RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 SIAH2O43255 324 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 CCP110O43303 1012 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 ECE2O60344 883 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.57
LMO3-224ENST00000540848 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
LMO3-224ENST00000540848 SHMT1P34896 483 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 MTMR2Q13614 643 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 PTPRNQ16849 979 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 SLC35G1Q2M3R5 365 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 DACT2Q5SW24 774 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 USP49Q70CQ1 688 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 TEX2Q8IWB9 1127 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 CTAGE1Q96RT6 745 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 NAP1L4Q99733 375 aaKnown RBP11.46□□□□□ -0.57
LMO3-224ENST00000540848 HSD3B7Q9H2F3 369 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 DDX4Q9NQI0 724 aaKnown RBP11.46□□□□□ -0.57
LMO3-224ENST00000540848 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 SYNPO2Q9UMS6 1093 aa11.46□□□□□ -0.57
LMO3-224ENST00000540848 PNMA6FA0A0J9YX94 578 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 F8W031 263 aaPredicted RBP11.45□□□□□ -0.58
LMO3-224ENST00000540848 SKILP12757 684 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 AKR1B1P15121 316 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
LMO3-224ENST00000540848 ZNF18P17022 549 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 BMP6P22004 513 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 ZNF543Q08ER8 600 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 USP17L2Q6R6M4 530 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 REXO1Q8N1G1 1221 aaKnown RBP11.45□□□□□ -0.58
LMO3-224ENST00000540848 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 MKL1Q969V6 931 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 VPS33BQ9H267 617 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 EVA1BQ9NVM1 165 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 PSME4Q14997 1843 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 SLX4Q8IY92 1834 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 ATRNL1Q5VV63 1379 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 A0A087X0B3 334 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 FOXN1O15353 648 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 ENTPD3O75355 529 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 OR52Z1P0C646 297 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 GJA5P36382 358 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 UBA7P41226 1012 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 PPP1R2P41236 205 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 STAT6P42226 847 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 SCNN1DP51172 638 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 SH3BP2P78314 561 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 INF2Q27J81 1249 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 CFAP100Q494V2 611 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 NOM1Q5C9Z4 860 aaKnown RBP11.45□□□□□ -0.58
LMO3-224ENST00000540848 SPATA1Q5VX52 437 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 TMC6Q7Z403 805 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 DCAF4Q8WV16 495 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 DBNDD1Q9H9R9 158 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 DISC1Q9NRI5 854 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 NFE2L3Q9Y4A8 694 aa11.45□□□□□ -0.58
LMO3-224ENST00000540848 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 SPTLC1O15269 473 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 SLC26A4O43511 780 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 CDK11BP21127 795 aaKnown RBP11.44□□□□□ -0.58
LMO3-224ENST00000540848 ADCY7P51828 1080 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 CCZ1BP86790 482 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
LMO3-224ENST00000540848 SPAG1Q07617 926 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 LRMPQ12912 555 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 KCNB1Q14721 858 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 RRAGBQ5VZM2 374 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 MYRIPQ8NFW9 859 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 CCDC47Q96A33 483 aaKnown RBP11.44□□□□□ -0.58
LMO3-224ENST00000540848 MTMR8Q96EF0 704 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 PIGSQ96S52 555 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 RAB34Q9BZG1 259 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 PAXBP1Q9Y5B6 917 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
LMO3-224ENST00000540848 CFAP99D6REC4 459 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 GTF2F1P35269 517 aaKnown RBP eCLIP11.43□□□□□ -0.58
LMO3-224ENST00000540848 AFMP43652 599 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 MRPL12P52815 198 aaKnown RBP11.43□□□□□ -0.58
LMO3-224ENST00000540848 CUL4BQ13620 913 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 IL17AQ16552 155 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
LMO3-224ENST00000540848 ZNF658Q5TYW1 1059 aaPredicted RBP11.43□□□□□ -0.58
LMO3-224ENST00000540848 DESI1Q6ICB0 168 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
LMO3-224ENST00000540848 TMEM179Q6ZVK1 233 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms