RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 HNRNPLLQ8WVV9 542 aaKnown RBP5.87□□□□□ -1.47
MDM2-227ENST00000540709 COPS5Q92905 334 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 PEX11GQ96HA9 241 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 CHAMP1Q96JM3 812 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 TINF2Q9BSI4 451 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 MTA3Q9BTC8 594 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
MDM2-227ENST00000540709 PPP1R1BQ9UD71 204 aaPredicted RBP5.87□□□□□ -1.47
MDM2-227ENST00000540709 C22orf46C9J442 243 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 TRIM13O60858 407 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 ASGR2P07307 311 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 FGRP09769 529 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 HOXA5P20719 270 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 PMLP29590 882 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 CTSWP56202 376 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 FOXO4P98177 505 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 SF1Q15637 639 aaKnown RBP5.86□□□□□ -1.47
MDM2-227ENST00000540709 PRSS53Q2L4Q9 553 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 MRM1Q6IN84 353 aaKnown RBP5.86□□□□□ -1.47
MDM2-227ENST00000540709 ANKS3Q6ZW76 656 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 CEP68Q76N32 757 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 FRS2Q8WU20 508 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 DPF3Q92784 378 aa5.86□□□□□ -1.47
MDM2-227ENST00000540709 IRS2Q9Y4H2 1338 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 AGRPO00253 132 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 MEFVO15553 781 aaPredicted RBP5.85□□□□□ -1.47
MDM2-227ENST00000540709 FPR2P25090 351 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 HOXC12P31275 282 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 EEPD1Q7L9B9 569 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 ADGRG2Q8IZP9 1017 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 MARCH10Q8NA82 808 aaPredicted RBP5.85□□□□□ -1.47
MDM2-227ENST00000540709 SYT8Q8NBV8 401 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 NETO2Q8NC67 525 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 FEZF2Q8TBJ5 459 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 DIO2Q92813 273 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 MMP19Q99542 508 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 TMEFF2Q9UIK5 374 aaPredicted RBP5.85□□□□□ -1.47
MDM2-227ENST00000540709 PMF1-BGLAPU3KQ54 211 aa5.85□□□□□ -1.47
MDM2-227ENST00000540709 MYO1BO43795 1136 aa5.84□□□□□ -1.47
MDM2-227ENST00000540709 BCL6P41182 706 aa5.84□□□□□ -1.47
MDM2-227ENST00000540709 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
MDM2-227ENST00000540709 CELF2-AS1Q8N7Q2 184 aa5.84□□□□□ -1.47
MDM2-227ENST00000540709 PLEKHO2Q8TD55 490 aa5.84□□□□□ -1.47
MDM2-227ENST00000540709 TRMT2BQ96GJ1 504 aaKnown RBP5.84□□□□□ -1.47
MDM2-227ENST00000540709 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.47
MDM2-227ENST00000540709 A0A1B0GTL3 188 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 ZBTB7AO95365 584 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 IGFBP6P24592 240 aaPredicted RBP5.83□□□□□ -1.48
MDM2-227ENST00000540709 CYP4F3Q08477 520 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 SLC9A5Q14940 896 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 IQCEQ6IPM2 695 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 PPIL6Q8IXY8 311 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 SMARCC2Q8TAQ2 1214 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 NPLOC4Q8TAT6 608 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 TSPAN17Q96FV3 270 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 KCNC2Q96PR1 638 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 AP5M1Q9H0R1 490 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 PCDHA2Q9Y5H9 948 aa5.83□□□□□ -1.48
MDM2-227ENST00000540709 OTOL1A6NHN0 477 aaPredicted RBP5.82□□□□□ -1.48
MDM2-227ENST00000540709 FFAR3O14843 346 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 CPP00450 1065 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 GRIA2P42262 883 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 SLC10A6Q3KNW5 377 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 MILR1Q7Z6M3 343 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 DCP2Q8IU60 420 aaKnown RBP5.82□□□□□ -1.48
MDM2-227ENST00000540709 CCDC103Q8IW40 242 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 LINC01356Q8N9X3 169 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 TMEM145Q8NBT3 493 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 FNIP1Q8TF40 1166 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 DDX11Q96FC9 970 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 TMEM169Q96HH4 297 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 C20orf173Q96LM9 149 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 CCDC140Q96MF4 163 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 TRIM55Q9BYV6 548 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 RNF38Q9H0F5 515 aa5.82□□□□□ -1.48
MDM2-227ENST00000540709 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
MDM2-227ENST00000540709 LCP1P13796 627 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 FBLN1P23142 703 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 PPP2R2AP63151 447 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 KCNAB2Q13303 367 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 E4F1Q66K89 784 aaPredicted RBP5.81□□□□□ -1.48
MDM2-227ENST00000540709 CD300LDQ6UXZ3 194 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 B3GNT8Q7Z7M8 397 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 RCBTB1Q8NDN9 531 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 ZNF526Q8TF50 670 aaPredicted RBP5.81□□□□□ -1.48
MDM2-227ENST00000540709 NOX5Q96PH1 765 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 SYT3Q9BQG1 590 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 YIPF4Q9BSR8 244 aa5.81□□□□□ -1.48
MDM2-227ENST00000540709 COA3Q9Y2R0 106 aaPredicted RBP5.81□□□□□ -1.48
MDM2-227ENST00000540709 CCDC85CA6NKD9 419 aa5.8□□□□□ -1.48
MDM2-227ENST00000540709 ARNTLO00327 626 aa5.8□□□□□ -1.48
MDM2-227ENST00000540709 SGSM2O43147 1006 aa5.8□□□□□ -1.48
MDM2-227ENST00000540709 STK10O94804 968 aaKnown RBP5.8□□□□□ -1.48
MDM2-227ENST00000540709 LTBRP36941 435 aa5.8□□□□□ -1.48
MDM2-227ENST00000540709 KCNC1P48547 511 aa5.8□□□□□ -1.48
MDM2-227ENST00000540709 GFRA1P56159 465 aa5.8□□□□□ -1.48
MDM2-227ENST00000540709 SMAD4Q13485 552 aaKnown RBP5.8□□□□□ -1.48
MDM2-227ENST00000540709 DDR2Q16832 855 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms