RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PLEKP08567 350 aaPredicted RBP13.67□□□□□ -0.22
NPC1-202ENST00000540608 TECP42680 631 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 NAPAP54920 295 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 KRT26Q7Z3Y9 468 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 NEK8Q86SG6 692 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
NPC1-202ENST00000540608 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
NPC1-202ENST00000540608 GDAP1L1Q96MZ0 367 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
NPC1-202ENST00000540608 TRIM34Q9BYJ4 488 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
NPC1-202ENST00000540608 SH2D4AQ9H788 454 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 ARHGAP20Q9P2F6 1191 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 FAM184BQ9ULE4 1060 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPC1-202ENST00000540608 GNA11P29992 359 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 GRIK5Q16478 980 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
NPC1-202ENST00000540608 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
NPC1-202ENST00000540608 PPFIA4O75335 1185 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 ORC2Q13416 577 aaPredicted RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 GSPT2Q8IYD1 628 aaKnown RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 NDST4Q9H3R1 872 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 ABCB11O95342 1321 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 LDHBP07195 334 aaKnown RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 KIF11P52732 1056 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 SMCR8Q8TEV9 937 aaPredicted RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 RSPH14Q9UHP6 348 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 FGFR1OPO95684 399 aaKnown RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 BAG3O95817 575 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 PPP4CP60510 307 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
NPC1-202ENST00000540608 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
NPC1-202ENST00000540608 SHOX2O60902 331 aaPredicted RBP13.65□□□□□ -0.22
NPC1-202ENST00000540608 TCP1P17987 556 aaKnown RBP13.65□□□□□ -0.22
NPC1-202ENST00000540608 RASA1P20936 1047 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 EIF4A3P38919 411 aaKnown RBP13.65□□□□□ -0.22
NPC1-202ENST00000540608 MAN2A1Q16706 1144 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 UNC13DQ70J99 1090 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 LRRC1Q9BTT6 524 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 MLXIPQ9HAP2 919 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 EPHB6O15197 1021 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 MOCS3O95396 460 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 SMARCA1P28370 1054 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 GSTO1P78417 241 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 NFIXQ14938 502 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 FAM76AQ8TAV0 307 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 TGFBRAP1Q8WUH2 860 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 RRP36Q96EU6 259 aaKnown RBP13.65□□□□□ -0.22
NPC1-202ENST00000540608 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
NPC1-202ENST00000540608 OSBPL9Q96SU4 736 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 DEF6Q9H4E7 631 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 ZNF287Q9HBT7 754 aa13.65□□□□□ -0.22
NPC1-202ENST00000540608 FAM207AQ9NSI2 230 aaPredicted RBP13.65□□□□□ -0.22
NPC1-202ENST00000540608 SBF2Q86WG5 1849 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 MYMKA6NI61 221 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 PJA2O43164 708 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 MAGEA9P43362 315 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 GRB10Q13322 594 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 SOGA3Q5TF21 947 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 GUF1Q8N442 669 aaKnown RBP13.64□□□□□ -0.23
NPC1-202ENST00000540608 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 HDAC7Q8WUI4 952 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
NPC1-202ENST00000540608 ALS2CR12Q96Q35 445 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 CPVLQ9H3G5 476 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 BLOC1S4Q9NUP1 217 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 STK17AQ9UEE5 414 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 RTCBQ9Y3I0 505 aaKnown RBP13.64□□□□□ -0.23
NPC1-202ENST00000540608 HYOU1Q9Y4L1 999 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 AKR1B10O60218 316 aa13.64□□□□□ -0.23
NPC1-202ENST00000540608 HOXA7P31268 230 aaPredicted RBP13.64□□□□□ -0.23
NPC1-202ENST00000540608 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
NPC1-202ENST00000540608 DMGDHQ9UI17 866 aaKnown RBP13.64□□□□□ -0.23
NPC1-202ENST00000540608 GOLGA6CA6NDK9 693 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 GOLGA6DP0CG33 693 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 TXKP42681 527 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms