RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LRRC53A6NM62 1247 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 SEMA3EO15041 775 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 KRT86O43790 486 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 STAT3P40763 770 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 KIF5AQ12840 1032 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 ECM1Q16610 540 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 CCDC51Q96ER9 411 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 BCAS3Q9H6U6 928 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 CD209Q9NNX6 404 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 RSPH14Q9UHP6 348 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
INO80E-203ENST00000540562 MEIS1O00470 390 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 RHOBTB3O94955 611 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 DNM2P50570 870 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 AMPD2Q01433 879 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 WDR66Q8TBY9 1149 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 CCDC47Q96A33 483 aaKnown RBP15.72■□□□□ 0.11
INO80E-203ENST00000540562 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
INO80E-203ENST00000540562 EHD4Q9H223 541 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 MKRN1Q9UHC7 482 aaKnown RBP15.72■□□□□ 0.11
INO80E-203ENST00000540562 CAPN11Q9UMQ6 739 aa15.72■□□□□ 0.11
INO80E-203ENST00000540562 CCNE1P24864 410 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 MIIPQ5JXC2 388 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 SV2BQ7L1I2 683 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 CALCOCO1Q9P1Z2 691 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 PDS5AQ29RF7 1337 aaKnown RBP15.71■□□□□ 0.11
INO80E-203ENST00000540562 E9PMD0 336 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 M0R2N6 131 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 TRAF5O00463 557 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 CYLC1P35663 651 aaPredicted RBP15.71■□□□□ 0.11
INO80E-203ENST00000540562 TMED8Q6PL24 325 aaPredicted RBP15.71■□□□□ 0.11
INO80E-203ENST00000540562 DDX12PQ92771 950 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 SALL4Q9UJQ4 1053 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
INO80E-203ENST00000540562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.71■□□□□ 0.1
INO80E-203ENST00000540562 ZSCAN5CA6NGD5 496 aaPredicted RBP15.71■□□□□ 0.1
INO80E-203ENST00000540562 GRB10Q13322 594 aa15.71■□□□□ 0.1
INO80E-203ENST00000540562 WHAMMP3Q1A5X7 153 aa15.71■□□□□ 0.1
INO80E-203ENST00000540562 TRAPPC3LQ5T215 181 aa15.71■□□□□ 0.1
INO80E-203ENST00000540562 SECISBP2LQ93073 1101 aaKnown RBP15.71■□□□□ 0.1
INO80E-203ENST00000540562 HAUS4Q9H6D7 363 aa15.71■□□□□ 0.1
INO80E-203ENST00000540562 ARHGAP20Q9P2F6 1191 aa15.71■□□□□ 0.1
INO80E-203ENST00000540562 RPS6KA4O75676 772 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 SRGNP10124 158 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 EEF1GP26641 437 aaKnown RBP15.7■□□□□ 0.1
INO80E-203ENST00000540562 GNAQP50148 359 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
INO80E-203ENST00000540562 CCDC40Q4G0X9 1142 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 TRAPPC11Q7Z392 1133 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 DMGDHQ9UI17 866 aaKnown RBP15.7■□□□□ 0.1
INO80E-203ENST00000540562 MAP2K7O14733 419 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 RNF40O75150 1001 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 FTCDO95954 541 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 LARP4BQ92615 738 aaKnown RBP15.7■□□□□ 0.1
INO80E-203ENST00000540562 DNAJC7Q99615 494 aa15.7■□□□□ 0.1
INO80E-203ENST00000540562 USP17L10C9JJH3 530 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 PCP11498 1178 aaKnown RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 USH1GQ495M9 461 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 SND1Q7KZF4 910 aaKnown RBP eCLIP15.69■□□□□ 0.1
INO80E-203ENST00000540562 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 LRRC1Q9BTT6 524 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 IKZF4Q9H2S9 585 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 NDST4Q9H3R1 872 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 THAP9Q9H5L6 903 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 BLOC1S4Q9NUP1 217 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 POLLQ9UGP5 575 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 PLCH1Q4KWH8 1693 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 EIF3JO75822 258 aaKnown RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 GNA11P29992 359 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 GGCXP38435 758 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 SLC1A4P43007 532 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 KIF11P52732 1056 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 GRAPQ13588 217 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 TRIM14Q14142 442 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 LEKR1Q6ZMV7 388 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 PNMA5Q96PV4 448 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 ZMYND12Q9H0C1 365 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 DDX4Q9NQI0 724 aaKnown RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.69■□□□□ 0.12e-8■■■■■ 67.3
INO80E-203ENST00000540562 RBM5P52756 815 aaKnown RBP eCLIP15.69■□□□□ 0.16e-7■■■□□ 17.6
INO80E-203ENST00000540562 KRT83P78385 493 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 CCDC181Q5TID7 509 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 KCTD16Q68DU8 428 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 KRT25Q7Z3Z0 450 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
INO80E-203ENST00000540562 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
INO80E-203ENST00000540562 PDHBP11177 359 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 CYP4A11Q02928 519 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 TXLNBQ8N3L3 684 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 MSANTD4Q8NCY6 345 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 NOC3LQ8WTT2 800 aaKnown RBP15.68■□□□□ 0.1
INO80E-203ENST00000540562 IFT81Q8WYA0 676 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 KIAA1024Q9UPX6 916 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
INO80E-203ENST00000540562 ADCY7P51828 1080 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms