RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ACLYP53396 1101 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 WTAPQ15007 396 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 OTOP2Q7RTS6 562 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 KLHDC9Q8NEP7 349 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 JMJD4Q9H9V9 463 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 VAT1LQ9HCJ6 419 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 USP34Q70CQ2 3546 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 MCM3APO60318 1980 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 DNAJC25-GNG10A0A024R161 153 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 MYADML2A6NDP7 307 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 PPP1R11O60927 126 aaPredicted RBP13.3□□□□□ -0.28
TMEM258-205ENST00000540434 ALAS1P13196 640 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 MCM5P33992 734 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 NT5C2P49902 561 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 GRM4Q14833 912 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 PSRC1Q6PGN9 363 aaPredicted RBP13.3□□□□□ -0.28
TMEM258-205ENST00000540434 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
TMEM258-205ENST00000540434 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 TBC1D5Q92609 795 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 MMP19Q99542 508 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 BRPF3Q9ULD4 1205 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 ASTN1O14525 1302 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 UMODL1Q5DID0 1318 aa13.3□□□□□ -0.28
TMEM258-205ENST00000540434 FGBP02675 491 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 PARP1P09874 1014 aaKnown RBP13.29□□□□□ -0.28
TMEM258-205ENST00000540434 FCER1AP12319 257 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 OAZ1P54368 228 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 JAKMIP1Q96N16 626 aaKnown RBP13.29□□□□□ -0.28
TMEM258-205ENST00000540434 TRERF1Q96PN7 1200 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 COG5Q9UP83 839 aa13.29□□□□□ -0.28
TMEM258-205ENST00000540434 SOWAHBA6NEL2 793 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 KLRF2D3W0D1 207 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 NFIBO00712 420 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 ICAM1P05362 532 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 AKR1A1P14550 325 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 KCNA10Q16322 511 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 ASPRV1Q53RT3 343 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 GPATCH4Q5T3I0 446 aaKnown RBP13.28□□□□□ -0.28
TMEM258-205ENST00000540434 RNF20Q5VTR2 975 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.28□□□□□ -0.28
TMEM258-205ENST00000540434 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
TMEM258-205ENST00000540434 CCDC144CPQ8IYA2 1237 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 HLA-CQ95604 372 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 MTMR8Q96EF0 704 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
TMEM258-205ENST00000540434 CCPG1Q9ULG6 757 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 DIS3Q9Y2L1 958 aaKnown RBP13.28□□□□□ -0.28
TMEM258-205ENST00000540434 SYNRGQ9UMZ2 1314 aa13.28□□□□□ -0.28
TMEM258-205ENST00000540434 MOXD2PA6NHM9 499 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 REC8O95072 547 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 FDX1P10109 184 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 LIFRP42702 1097 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 CDC37Q16543 378 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-205ENST00000540434 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 SPRED2Q7Z698 418 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
TMEM258-205ENST00000540434 CHST13Q8NET6 341 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 TMEM87BQ96K49 555 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 PIGSQ96S52 555 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
TMEM258-205ENST00000540434 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-205ENST00000540434 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-205ENST00000540434 ELP1O95163 1332 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 MYH6P13533 1939 aa13.27□□□□□ -0.29
TMEM258-205ENST00000540434 ERICH2A1L162 156 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 OPLAHO14841 1288 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
TMEM258-205ENST00000540434 SNAI1O95863 264 aaPredicted RBP13.26□□□□□ -0.29
TMEM258-205ENST00000540434 CA3P07451 260 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 CCL23P55773 120 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 KCTD2Q14681 263 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 USH1GQ495M9 461 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 Q6ZUG5 572 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 MTA3Q9BTC8 594 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 ACAD9Q9H845 621 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 BRWD1Q9NSI6 2320 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 CYP39A1Q9NYL5 469 aa13.26□□□□□ -0.29
TMEM258-205ENST00000540434 MROH7Q68CQ1 1323 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 hCG_1642624A0A1W2PR95 340 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 ARVCFO00192 962 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 CD4P01730 458 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 POU3F3P20264 500 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms