RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 NEDD1Q8NHV4 660 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
NEK6-213ENST00000540326 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 TNRC6CQ9HCJ0 1690 aaKnown RBP13.84□□□□□ -0.19
NEK6-213ENST00000540326 SLC37A4O43826 429 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 TDP2O95551 362 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 MYBL2P10244 700 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 ACTN2P35609 894 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 NT5C2P49902 561 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 VAV2P52735 878 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 C2orf54Q08AI8 447 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 CENPPQ6IPU0 288 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 FAM71BQ8TC56 605 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 ZFP91Q96JP5 570 aaPredicted RBP13.84□□□□□ -0.19
NEK6-213ENST00000540326 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 CAPN6Q9Y6Q1 641 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 EIF6P56537 245 aaKnown RBP13.83□□□□□ -0.19
NEK6-213ENST00000540326 CALCRLQ16602 461 aa13.83□□□□□ -0.19
NEK6-213ENST00000540326 VWA3BQ502W6 1294 aa13.83□□□□□ -0.19
NEK6-213ENST00000540326 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.19
NEK6-213ENST00000540326 GLIS3Q8NEA6 775 aa13.83□□□□□ -0.19
NEK6-213ENST00000540326 CDK5RAP3Q96JB5 506 aa13.83□□□□□ -0.19
NEK6-213ENST00000540326 NUDT12Q9BQG2 462 aa13.83□□□□□ -0.19
NEK6-213ENST00000540326 IFIH1Q9BYX4 1025 aaKnown RBP13.83□□□□□ -0.19
NEK6-213ENST00000540326 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.19
NEK6-213ENST00000540326 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.19
NEK6-213ENST00000540326 A0A1W2PQJ5 194 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 TULP2O00295 520 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 RGL2O15211 777 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 CKAP4Q07065 602 aaKnown RBP13.83□□□□□ -0.2
NEK6-213ENST00000540326 LRRC41Q15345 812 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 CLEC10AQ8IUN9 316 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 RIN2Q8WYP3 895 aaPredicted RBP13.83□□□□□ -0.2
NEK6-213ENST00000540326 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
NEK6-213ENST00000540326 PNMA5Q96PV4 448 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 MTMR9Q96QG7 549 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 PURBQ96QR8 312 aaKnown RBP13.83□□□□□ -0.2
NEK6-213ENST00000540326 PSMB7Q99436 277 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 DEF6Q9H4E7 631 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 FAM204AQ9H8W3 233 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 MLXIPQ9HAP2 919 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 CD209Q9NNX6 404 aa13.83□□□□□ -0.2
NEK6-213ENST00000540326 ANO9A1A5B4 782 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 UFL1O94874 794 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 MOCS3O95396 460 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 GPSM2P81274 684 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 FIGNQ5HY92 759 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 LEKR1Q6ZMV7 388 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 CCDC155Q8N6L0 562 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 GJA10Q969M2 543 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 ACBD3Q9H3P7 528 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 COL24A1Q17RW2 1714 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 DDX60LQ5H9U9 1706 aaKnown RBP13.82□□□□□ -0.2
NEK6-213ENST00000540326 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 RNF40O75150 1001 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 SYF2O95926 243 aaKnown RBP13.82□□□□□ -0.2
NEK6-213ENST00000540326 RFC4P35249 363 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 EIF4A3P38919 411 aaKnown RBP13.82□□□□□ -0.2
NEK6-213ENST00000540326 PPP1R2P41236 205 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 KIF11P52732 1056 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 MRPS25P82663 173 aaKnown RBP13.82□□□□□ -0.2
NEK6-213ENST00000540326 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 LRRC47Q8N1G4 583 aaKnown RBP13.82□□□□□ -0.2
NEK6-213ENST00000540326 RPGRIP1Q96KN7 1286 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 MED4Q9NPJ6 270 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 HPCAL4Q9UM19 191 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 PCDHA13Q9Y5I0 950 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 MYH10P35580 1976 aa13.82□□□□□ -0.2
NEK6-213ENST00000540326 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 EDIL3O43854 480 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 AKR1B10O60218 316 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 PDHBP11177 359 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 CXCR5P32302 372 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 CDK17Q00537 523 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 MAP9Q49MG5 647 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 UNC13DQ70J99 1090 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 CNBD1Q8NA66 436 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 UIMC1Q96RL1 719 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 CDK5RAP2Q96SN8 1893 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 TARSL2A2RTX5 802 aaKnown RBP13.81□□□□□ -0.2
NEK6-213ENST00000540326 USO1O60763 962 aaKnown RBP13.81□□□□□ -0.2
NEK6-213ENST00000540326 MCM3P25205 808 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.2
NEK6-213ENST00000540326 RHBDL3P58872 404 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
NEK6-213ENST00000540326 CREG2Q8IUH2 290 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 TRIM58Q8NG06 486 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 SNX29Q8TEQ0 813 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 DDX12PQ92771 950 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 LCMT1Q9UIC8 334 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms