RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.23
CYB561A3-215ENST00000540317 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 GOLGA6L19H0YKK7 550 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 hCG_1984214I3L0E3 225 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 FLOT1O75955 427 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 PTMAP06454 111 aaKnown RBP13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 TPM3P06753 285 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 GJA8P48165 433 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 NPY5RQ15761 445 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 ASPRV1Q53RT3 343 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 BLIDQ8IZY5 108 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 ZNF713Q8N859 430 aaPredicted RBP13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 SHISA4Q96DD7 197 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 VCPKMTQ9H867 229 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 BTBD7Q9P203 1132 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 PCDHA4Q9UN74 947 aa13.58□□□□□ -0.24
CYB561A3-215ENST00000540317 MGAMO43451 1857 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 hCG_1642624A0A1W2PR95 340 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 CNMDO75829 334 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 TTLL1O95922 423 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 TFRCP02786 760 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 HMGCRP04035 888 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 TTC38Q5R3I4 469 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 PRPF38BQ5VTL8 546 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 LBX2Q6XYB7 198 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 U2AF1L4Q8WU68 220 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 RRP36Q96EU6 259 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 DEFB118Q96PH6 123 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 BPIFA3Q9BQP9 254 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 DNAJC25Q9H1X3 360 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 GOPCQ9HD26 462 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 IVNS1ABPQ9Y6Y0 642 aa13.57□□□□□ -0.24
CYB561A3-215ENST00000540317 DOCK3Q8IZD9 2030 aa13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 MKI67P46013 3256 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 GOLGA6L6A8MZA4 724 aa13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 SGPL1O95470 568 aa13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 MSNP26038 577 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 PLS1Q14651 629 aa13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 CLIC6Q96NY7 704 aa13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-215ENST00000540317 BECN2A8MW95 431 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 XRCC5P13010 732 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 DSG3P32926 999 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 CLCN1P35523 988 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 RGS2P41220 211 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 NLRP12P59046 1061 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 TRIM32Q13049 653 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 IQCB1Q15051 598 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 TRIB2Q92519 343 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 MYH8P13535 1937 aa13.55□□□□□ -0.24
CYB561A3-215ENST00000540317 STXBP3O00186 592 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 GNA11P29992 359 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 ATP2C1P98194 919 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 MORN1Q5T089 497 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 GPATCH4Q5T3I0 446 aaKnown RBP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 ARL6IP4Q66PJ3 421 aaKnown RBP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 TRMT44Q8IYL2 757 aaKnown RBP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 SMTNL1A8MU46 457 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 CYTH3O43739 400 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 PDHBP11177 359 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 ATP2B1P20020 1258 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 TPM4P67936 248 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 MAP2K5Q13163 448 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 SARM1Q6SZW1 724 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 PIK3AP1Q6ZUJ8 805 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 USP6NLQ92738 828 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 MOV10L1Q9BXT6 1211 aaKnown RBP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 C6orf50Q9HD87 102 aa13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 PAK6Q9NQU5 681 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-215ENST00000540317 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms