RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 RFXAPO00287 272 aa16.72■□□□□ 0.27
SEMA4D-222ENST00000540183 CHMP4BP1P59074 171 aa16.72■□□□□ 0.27
SEMA4D-222ENST00000540183 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
SEMA4D-222ENST00000540183 PPP2R2DQ66LE6 453 aa16.72■□□□□ 0.27
SEMA4D-222ENST00000540183 BAZ2BQ9UIF8 2168 aaKnown RBP16.72■□□□□ 0.27
SEMA4D-222ENST00000540183 WDR19Q8NEZ3 1342 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 DOCK5Q9H7D0 1870 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 LOC102724159A0A0B4J2E5 919 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 TXNP10599 105 aaKnown RBP16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 ATP2A2P16615 1042 aaKnown RBP16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 SDSP20132 328 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 PWP2Q15269 919 aaKnown RBP16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 MICALL1Q8N3F8 863 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 TTC14Q96N46 770 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 CERS4Q9HA82 394 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
SEMA4D-222ENST00000540183 A6NJR5 290 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 TNFRSF10AO00220 468 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 SUPT20HL2P0C7V6 817 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 DNERQ8NFT8 737 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 ASB2Q96Q27 587 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 TAAR1Q96RJ0 339 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 PCDHA11Q9Y5I1 949 aa16.7■□□□□ 0.26
SEMA4D-222ENST00000540183 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 KDM4AO75164 1064 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 CA3P07451 260 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 PLEKHM2Q8IWE5 1019 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 ATXN2LQ8WWM7 1075 aaKnown RBP16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 ESR2Q92731 530 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 CTAGE1Q96RT6 745 aa16.69■□□□□ 0.26
SEMA4D-222ENST00000540183 B4E1Z4 1266 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 ZNF213O14771 459 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 IGHDP01880 384 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 IQCF3P0C7M6 154 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 KRT40Q6A162 431 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 NFRKBQ6P4R8 1299 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 SEPT14Q6ZU15 432 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 SPRED2Q7Z698 418 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 ADGRF4Q8IZF3 695 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 SYTL5Q8TDW5 730 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 ADAMTS19Q8TE59 1207 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 RAD50Q92878 1312 aa16.68■□□□□ 0.26
SEMA4D-222ENST00000540183 PFKMP08237 780 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 MMP3P08254 477 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 PCP11498 1178 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 TMEM67Q5HYA8 995 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 GDF6Q6KF10 455 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 TMCO2Q7Z6W1 182 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 DGKHQ86XP1 1220 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 KAT2BQ92831 832 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 NECAB3Q96P71 396 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 VAT1LQ9HCJ6 419 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 PNMA2Q9UL42 364 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 BDP1A6H8Y1 2624 aa16.67■□□□□ 0.26
SEMA4D-222ENST00000540183 MRPS5P82675 430 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 TFF2Q03403 129 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 GPNMBQ14956 572 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 PTGISQ16647 500 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 TCTN1Q2MV58 587 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 ENAHQ8N8S7 591 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 RETREG2Q8NC44 543 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 DHX38Q92620 1227 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 IL25Q9H293 177 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 RAPGEFL1Q9UHV5 662 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 ABCB11O95342 1321 aa16.66■□□□□ 0.26
SEMA4D-222ENST00000540183 PITPNM1O00562 1244 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 KPNA6O60684 536 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 ACTN1P12814 892 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 EIF2AK2P19525 551 aaKnown RBP16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 ZSCAN10Q96SZ4 725 aaPredicted RBP16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 SIP14410 1827 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 MICAL3Q7RTP6 2002 aa16.65■□□□□ 0.26
SEMA4D-222ENST00000540183 BRWD1Q9NSI6 2320 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms