RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RMDN3Q96TC7 470 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 TMEM260Q9NX78 707 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 COL20A1Q9P218 1284 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 SRRDQ9UH36 339 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 M0R2N6 131 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 COBLO75128 1261 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 HOXC6P09630 235 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 NR5A1Q13285 461 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 ZNF792Q3KQV3 632 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 USP6NLQ92738 828 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 ANO3Q9BYT9 981 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 PLXNB2O15031 1838 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 MGAMO43451 1857 aa17.62■□□□□ 0.41
DDB1-216ENST00000539739 LOC102724159A0A0B4J2E5 919 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 CYP2B6P20813 491 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 FLT3LGP49771 235 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 PRMT2P55345 433 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 PRKCZQ05513 592 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 NONOQ15233 471 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDB1-216ENST00000539739 PWP2Q15269 919 aaKnown RBP17.61■□□□□ 0.41
DDB1-216ENST00000539739 APBA2Q99767 749 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 PXMP2Q9NR77 195 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 MTMR6Q9Y217 621 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
DDB1-216ENST00000539739 ASB14A6NK59 587 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 ADAMTS3O15072 1205 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 XRCC5P13010 732 aaKnown RBP17.61■□□□□ 0.41
DDB1-216ENST00000539739 U2AF2P26368 475 aaKnown RBP eCLIP17.61■□□□□ 0.419e-8■■■■■ 32.2
DDB1-216ENST00000539739 ALDH5A1P51649 535 aaPredicted RBP17.61■□□□□ 0.41
DDB1-216ENST00000539739 LBX1P52954 281 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 PIK3AP1Q6ZUJ8 805 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 ZNF467Q7Z7K2 595 aaPredicted RBP17.61■□□□□ 0.41
DDB1-216ENST00000539739 NOSTRINQ8IVI9 506 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 DOCK3Q8IZD9 2030 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 PGBD1Q96JS3 809 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 PURBQ96QR8 312 aaKnown RBP17.61■□□□□ 0.41
DDB1-216ENST00000539739 IWS1Q96ST2 819 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 GABRQQ9UN88 632 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 TRIM17Q9Y577 477 aa17.61■□□□□ 0.41
DDB1-216ENST00000539739 ZNFX1Q9P2E3 1918 aaKnown RBP17.6■□□□□ 0.41
DDB1-216ENST00000539739 SOWAHBA6NEL2 793 aa17.6■□□□□ 0.41
DDB1-216ENST00000539739 EIF2AK2P19525 551 aaKnown RBP17.6■□□□□ 0.41
DDB1-216ENST00000539739 CAP1Q01518 475 aa17.6■□□□□ 0.41
DDB1-216ENST00000539739 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
DDB1-216ENST00000539739 MAML3Q96JK9 1138 aa17.6■□□□□ 0.41
DDB1-216ENST00000539739 ZNF236Q9UL36 1845 aa17.6■□□□□ 0.41
DDB1-216ENST00000539739 IRF5Q13568 498 aa17.59■□□□□ 0.41
DDB1-216ENST00000539739 OTOP1Q7RTM1 612 aa17.59■□□□□ 0.41
DDB1-216ENST00000539739 TRMT44Q8IYL2 757 aaKnown RBP17.59■□□□□ 0.41
DDB1-216ENST00000539739 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
DDB1-216ENST00000539739 NPLOC4Q8TAT6 608 aa17.59■□□□□ 0.41
DDB1-216ENST00000539739 TNFRSF25Q93038 417 aa17.59■□□□□ 0.41
DDB1-216ENST00000539739 PDCD2LQ9BRP1 358 aa17.59■□□□□ 0.41
DDB1-216ENST00000539739 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
DDB1-216ENST00000539739 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 RPTORQ8N122 1335 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 NR3C2P08235 984 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 SREBF1P36956 1147 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 NUCB2P80303 420 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 ARHGAP4P98171 946 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 PDE4DQ08499 809 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 PGM5Q15124 567 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 XRRA1Q6P2D8 792 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 BRAPQ7Z569 592 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 TBCKQ8TEA7 893 aa17.58■□□□□ 0.41
DDB1-216ENST00000539739 KIF28PB7ZC32 967 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 ZSCAN22P10073 491 aaPredicted RBP17.58■□□□□ 0.4
DDB1-216ENST00000539739 MYCLP12524 364 aaPredicted RBP17.58■□□□□ 0.4
DDB1-216ENST00000539739 CCND2P30279 289 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 UBXN2AP68543 259 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 STXBP2Q15833 593 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 INF2Q27J81 1249 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 OLFML2BQ68BL8 750 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 FGD4Q96M96 766 aa17.58■□□□□ 0.4
DDB1-216ENST00000539739 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.4
DDB1-216ENST00000539739 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
DDB1-216ENST00000539739 ASTN1O14525 1302 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 ZSWIM8A7E2V4 1837 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 USP11P51784 963 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 EARS2Q5JPH6 523 aaKnown RBP17.57■□□□□ 0.4
DDB1-216ENST00000539739 PCNX4Q63HM2 1172 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 MAMDC4Q6UXC1 1216 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 NEK8Q86SG6 692 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 TINF2Q9BSI4 451 aa17.57■□□□□ 0.4
DDB1-216ENST00000539739 SYNGAP1Q96PV0 1343 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 STAM2O75886 525 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 BRD1O95696 1058 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 CYP3A4P08684 503 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 EDNRBP24530 442 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 DDIT3P35638 169 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 ZNF76P36508 570 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 PKP1Q13835 747 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
DDB1-216ENST00000539739 ARMCX2Q7L311 632 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 VSIG10LQ86VR7 867 aa17.56■□□□□ 0.4
DDB1-216ENST00000539739 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
DDB1-216ENST00000539739 NAP1L4Q99733 375 aaKnown RBP17.56■□□□□ 0.4
DDB1-216ENST00000539739 ADCY3O60266 1144 aa17.55■□□□□ 0.4
DDB1-216ENST00000539739 EIF3JO75822 258 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms