RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 SRPRBQ9Y5M8 271 aaKnown RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 A0A1W2PQ27 194 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 A0A1W2PQ64 194 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 A0A1W2PQD8 194 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 FAM155AB1AL88 458 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 LAD1O00515 517 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 SLC25A27O95847 323 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 BAATQ14032 418 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 PPP4R3AQ6IN85 833 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 CCAR1Q8IX12 1150 aaKnown RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 MAF1Q9H063 256 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 TMEM60Q9H2L4 133 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 COPB2P35606 906 aa18.34■□□□□ 0.53
TRAF3-204ENST00000539721 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
TRAF3-204ENST00000539721 FSIP1Q8NA03 581 aa18.34■□□□□ 0.53
TRAF3-204ENST00000539721 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
TRAF3-204ENST00000539721 DDX25Q9UHL0 483 aaKnown RBP18.34■□□□□ 0.53
TRAF3-204ENST00000539721 SLC37A4O43826 429 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 CYP3A4P08684 503 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 OR52Z1P0C646 297 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.53
TRAF3-204ENST00000539721 ERVK-9P63128 1117 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 ERVK-24P63145 666 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 UBXN2AP68543 259 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 Q3C1V9 767 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 ARL6IP4Q66PJ3 421 aaKnown RBP18.33■□□□□ 0.53
TRAF3-204ENST00000539721 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.53
TRAF3-204ENST00000539721 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.53
TRAF3-204ENST00000539721 VWA3AA6NCI4 1184 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 IGF2BP3O00425 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAF3-204ENST00000539721 LIG1P18858 919 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 ERCC3P19447 782 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 ZNF76P36508 570 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 INHBEP58166 350 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 GRIN1Q05586 938 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 GRM1Q13255 1194 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CALCRLQ16602 461 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CCDC73Q6ZRK6 1079 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 ANKRD35Q8N283 1001 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 TAAR1Q96RJ0 339 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 RPTORQ8N122 1335 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CYP3A7-CYP3A51PA0A087WV96 503 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 PFASO15067 1338 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 LCTP09848 1927 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CMA1P23946 247 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CYP3A7P24462 503 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 PRPHP41219 470 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 SREBF2Q12772 1141 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
TRAF3-204ENST00000539721 SHC4Q6S5L8 630 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 DTHD1Q6ZMT9 781 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 ANKRD13CQ8N6S4 541 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 ZNF579Q8NAF0 562 aaKnown RBP18.32■□□□□ 0.52
TRAF3-204ENST00000539721 GPRC5AQ8NFJ5 357 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CSRNP2Q9H175 543 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 GOLPH3LQ9H4A5 285 aa18.32■□□□□ 0.52
TRAF3-204ENST00000539721 ZCCHC17Q9NP64 241 aaKnown RBP18.32■□□□□ 0.52
TRAF3-204ENST00000539721 CIITAP33076 1130 aa18.31■□□□□ 0.52
TRAF3-204ENST00000539721 RESP18Q5W5W9 173 aa18.31■□□□□ 0.52
TRAF3-204ENST00000539721 MBOAT7Q96N66 472 aa18.31■□□□□ 0.52
TRAF3-204ENST00000539721 RMDN3Q96TC7 470 aa18.31■□□□□ 0.52
TRAF3-204ENST00000539721 FRMPD4Q14CM0 1322 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 A0A1B0GVL5 298 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 MARCH6O60337 910 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 EIF2AK2P19525 551 aaKnown RBP18.3■□□□□ 0.52
TRAF3-204ENST00000539721 CCNA1P78396 465 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 SPECC1Q5M775 1068 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 WDR78Q5VTH9 848 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 ARHGEF16Q5VV41 709 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 CYP4F22Q6NT55 531 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 IFNL1Q8IU54 200 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 SHCBP1Q8NEM2 672 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 PURBQ96QR8 312 aaKnown RBP18.3■□□□□ 0.52
TRAF3-204ENST00000539721 MROH8Q9H579 483 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 PXMP2Q9NR77 195 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 APLP1P51693 650 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 TAF1CQ15572 869 aaPredicted RBP18.3■□□□□ 0.52
TRAF3-204ENST00000539721 IL17AQ16552 155 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 Q4G0T1 1027 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 PRR16Q569H4 304 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
TRAF3-204ENST00000539721 MTMR9Q96QG7 549 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
TRAF3-204ENST00000539721 FAM86B1E9PN63 330 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 NR1I2O75469 434 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 FAM86B2P0C5J1 330 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 PFKFB1P16118 471 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 LONP1P36776 959 aaKnown RBP18.29■□□□□ 0.52
TRAF3-204ENST00000539721 TXKP42681 527 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 FAM160A1Q05DH4 1040 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 PGM5Q15124 567 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 DACT1Q9NYF0 836 aa18.29■□□□□ 0.52
TRAF3-204ENST00000539721 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 NDUFA8P51970 172 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 TMEM266Q2M3C6 531 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 DEFB115Q30KQ5 88 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms