RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 NAP1L5Q96NT1 182 aaPredicted RBP11.42□□□□□ -0.58
SPARC-209ENST00000539687 HSD3B7Q9H2F3 369 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
SPARC-209ENST00000539687 EXOC1Q9NV70 894 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
SPARC-209ENST00000539687 BRCA1P38398 1863 aaKnown RBP11.41□□□□□ -0.58
SPARC-209ENST00000539687 WNT10BO00744 389 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 KIF20AO95235 890 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 FDX1P10109 184 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 SREBF1P36956 1147 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPARC-209ENST00000539687 PSMD2Q13200 908 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 Q4G0T1 1027 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 NAALADL2Q58DX5 795 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 HYIQ5T013 277 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 CDKAL1Q5VV42 579 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 SPECC1LQ69YQ0 1117 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 FOXR2Q6PJQ5 311 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 GIMAP8Q8ND71 665 aaPredicted RBP11.41□□□□□ -0.58
SPARC-209ENST00000539687 SNX29Q8TEQ0 813 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 FAM20AQ96MK3 541 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
SPARC-209ENST00000539687 MAGEC2Q9UBF1 373 aaPredicted RBP11.41□□□□□ -0.58
SPARC-209ENST00000539687 NRBP1Q9UHY1 535 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 PCDHA12Q9UN75 941 aa11.41□□□□□ -0.58
SPARC-209ENST00000539687 ITIH6Q6UXX5 1313 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 COL4A5P29400 1685 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 A0A1B0GTH6 734 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 GOLGA6L9A6NEM1 432 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 WDR46O15213 610 aaKnown RBP11.4□□□□□ -0.58
SPARC-209ENST00000539687 TDP2O95551 362 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 CYP3A4P08684 503 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 ATP1A3P13637 1013 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 EEF1GP26641 437 aaKnown RBP11.4□□□□□ -0.58
SPARC-209ENST00000539687 CIITAP33076 1130 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 ASIC1P78348 528 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 ARHGAP4P98171 946 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 UBE2SQ16763 222 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 APOBEC3FQ8IUX4 373 aaKnown RBP11.4□□□□□ -0.58
SPARC-209ENST00000539687 ADSSL1Q8N142 457 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 NELFBQ8WX92 580 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 LARP4BQ92615 738 aaKnown RBP11.4□□□□□ -0.58
SPARC-209ENST00000539687 CCDC51Q96ER9 411 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 FEZ1Q99689 392 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 TRIM9Q9C026 710 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 BLZF1Q9H2G9 400 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 THAP9Q9H5L6 903 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 MAP3K20Q9NYL2 800 aaKnown RBP11.4□□□□□ -0.58
SPARC-209ENST00000539687 LIMA1Q9UHB6 759 aaKnown RBP11.4□□□□□ -0.58
SPARC-209ENST00000539687 PYCARDQ9ULZ3 195 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 CTNND2Q9UQB3 1225 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPARC-209ENST00000539687 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.58
SPARC-209ENST00000539687 BAZ2BQ9UIF8 2168 aaKnown RBP11.4□□□□□ -0.59
SPARC-209ENST00000539687 LRRC10BA6NIK2 292 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 MEIS2O14770 477 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 SLC37A4O43826 429 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 CTNND1O60716 968 aaKnown RBP11.39□□□□□ -0.59
SPARC-209ENST00000539687 USP14P54578 494 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 CCZ1BP86790 482 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
SPARC-209ENST00000539687 NR1I3Q14994 352 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 KMT5BQ4FZB7 885 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 TMEM119Q4V9L6 283 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 KLHL10Q6JEL2 608 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 PPFIBP1Q86W92 1011 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 MCF2L2Q86YR7 1114 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 RAD54LQ92698 747 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 IQCDQ96DY2 449 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 MTRQ99707 1265 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 NAA15Q9BXJ9 866 aaKnown RBP11.39□□□□□ -0.59
SPARC-209ENST00000539687 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 AS3MTQ9HBK9 375 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 KCNMB3Q9NPA1 279 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 PAXBP1Q9Y5B6 917 aa11.39□□□□□ -0.59
SPARC-209ENST00000539687 A0A1W2PRG0 241 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 PP2D1A8MPX8 630 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 GCOM1H8Y6P7 765 aaPredicted RBP11.38□□□□□ -0.59
SPARC-209ENST00000539687 FZD9O00144 591 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 NFKBIEO00221 500 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 KLRC4O43908 158 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 POLR2MP0CAP2 368 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
SPARC-209ENST00000539687 HSPA6P17066 643 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 MUTP22033 750 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 SETQ01105 290 aaPredicted RBP11.38□□□□□ -0.59
SPARC-209ENST00000539687 PDE4DQ08499 809 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 LRMPQ12912 555 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 RASA3Q14644 834 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
SPARC-209ENST00000539687 CRYGNQ8WXF5 182 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 MMTAG2Q9BU76 263 aaKnown RBP11.38□□□□□ -0.59
SPARC-209ENST00000539687 TMEM39BQ9GZU3 492 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 MAF1Q9H063 256 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 KIAA1683Q9H0B3 1180 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms