RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 GHRHRQ02643 423 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 QRICH1Q2TAL8 776 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 TMEM63BQ5T3F8 832 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 IFIT1BQ5T764 474 aaKnown RBP10.09□□□□□ -0.79
DDB1-212ENST00000538470 TTC22Q5TAA0 569 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 NFRKBQ6P4R8 1299 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 C16orf59Q7L2K0 433 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 FBXO11Q86XK2 927 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 RPUSD2Q8IZ73 545 aaKnown RBP10.09□□□□□ -0.79
DDB1-212ENST00000538470 ADGRF4Q8IZF3 695 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 IWS1Q96ST2 819 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 UBA5Q9GZZ9 404 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 TRPV6Q9H1D0 765 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 WNT8AQ9H1J5 351 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 ZSWIM5Q9P217 1185 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 MRPL11Q9Y3B7 192 aaKnown RBP10.09□□□□□ -0.79
DDB1-212ENST00000538470 UMODL1Q5DID0 1318 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 TTC28Q96AY4 2481 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 FGBP02675 491 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 MYL3P08590 195 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 ACRP10323 421 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 TXNP10599 105 aaKnown RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 GSPT1P15170 499 aaKnown RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 RFC2P35250 354 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 TRDNQ13061 729 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 TRAF1Q13077 416 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 SAMD3Q8N6K7 520 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 SYTL5Q8TDW5 730 aaPredicted RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 NSUN6Q8TEA1 469 aaKnown RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 PBX4Q9BYU1 374 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 ZNF576Q9H609 170 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 MAP3K20Q9NYL2 800 aaKnown RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 MSRAQ9UJ68 235 aa10.08□□□□□ -0.8
DDB1-212ENST00000538470 BAZ2BQ9UIF8 2168 aaKnown RBP10.08□□□□□ -0.8
DDB1-212ENST00000538470 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 GH1P01241 217 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 HSD17B4P51659 736 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 CCL23P55773 120 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 SEC23AQ15436 765 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 STXBP2Q15833 593 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 CCDC62Q6P9F0 684 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 CCDC155Q8N6L0 562 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 EMID1Q96A84 441 aaPredicted RBP10.07□□□□□ -0.8
DDB1-212ENST00000538470 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 RMDN3Q96TC7 470 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
DDB1-212ENST00000538470 AMNQ9BXJ7 453 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 IL25Q9H293 177 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 JMJD4Q9H9V9 463 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 TRMT13Q9NUP7 481 aaKnown RBP10.07□□□□□ -0.8
DDB1-212ENST00000538470 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
DDB1-212ENST00000538470 PTPRSQ13332 1948 aa10.07□□□□□ -0.8
DDB1-212ENST00000538470 TET1Q8NFU7 2136 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 ERICH2A1L162 156 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 ARIH2O95376 493 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 MMP3P08254 477 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 PDE4AP27815 886 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 SART3Q15020 963 aaKnown RBP10.06□□□□□ -0.8
DDB1-212ENST00000538470 NBPF20Q3BBV1 942 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 ARHGEF16Q5VV41 709 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 OTOP2Q7RTS6 562 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 RALYLQ86SE5 291 aaKnown RBP10.06□□□□□ -0.8
DDB1-212ENST00000538470 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 COPS5Q92905 334 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
DDB1-212ENST00000538470 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 CXXC1Q9P0U4 656 aaPredicted RBP10.06□□□□□ -0.8
DDB1-212ENST00000538470 COL20A1Q9P218 1284 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 NOD1Q9Y239 953 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 SUPT16HQ9Y5B9 1047 aaKnown RBP10.06□□□□□ -0.8
DDB1-212ENST00000538470 SLC4A7Q9Y6M7 1214 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
DDB1-212ENST00000538470 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
DDB1-212ENST00000538470 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 ZBTB5O15062 677 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 EIF3JO75822 258 aaKnown RBP10.05□□□□□ -0.8
DDB1-212ENST00000538470 CFBP00751 764 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 CYP2C9P11712 490 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 ACTN1P12814 892 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 EIF2AK2P19525 551 aaKnown RBP10.05□□□□□ -0.8
DDB1-212ENST00000538470 CHMLP26374 656 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 PBX2P40425 430 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 RBL2Q08999 1139 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 BFSP2Q13515 415 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 GRM4Q14833 912 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 CYB5R4Q7L1T6 521 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 STAG2Q8N3U4 1231 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 SCLYQ96I15 445 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 KATNAL1Q9BW62 490 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms