RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 B4DLN1 442 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 STXBP3O00186 592 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 PIK3CDO00329 1044 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 MEIS2O14770 477 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 ADCYAP1R1P41586 468 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 MRPL12P52815 198 aaKnown RBP26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 PKN1Q16512 942 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 PFKFB3Q16875 520 aaPredicted RBP26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 USP17L6PQ6QN14 398 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 FCHSD1Q86WN1 690 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 PAWRQ96IZ0 340 aaKnown RBP26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 PSTPIP2Q9H939 334 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 XPNPEP3Q9NQH7 507 aa26.18■■□□□ 1.78
SFSWAP-204ENST00000535399 RBM47A0AV96 593 aaKnown RBP26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 hCG_1984214I3L0E3 225 aa26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 DUSP11O75319 330 aaKnown RBP26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 SCG2P13521 617 aa26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 PPP1R18Q6NYC8 613 aa26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 ZNF713Q8N859 430 aaPredicted RBP26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 PDCD2LQ9BRP1 358 aa26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 RNF26Q9BY78 433 aaPredicted RBP26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 BARHL2Q9NY43 387 aa26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 RBM27Q9P2N5 1060 aaKnown RBP26.17■■□□□ 1.78
SFSWAP-204ENST00000535399 PFKFB2O60825 505 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 PPFIA3O75145 1194 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 PGK1P00558 417 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 NR3C2P08235 984 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 TNFAIP2Q03169 654 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 SCRN1Q12765 414 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 LRRC41Q15345 812 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 IQSEC1Q6DN90 963 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 NECAB2Q7Z6G3 386 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 ARRDC4Q8NCT1 418 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 CUL5Q93034 780 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 SLC26A6Q9BXS9 759 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 SLKQ9H2G2 1235 aaPredicted RBP26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 GNEQ9Y223 722 aaKnown RBP26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 LRRC37A2A6NM11 1700 aa26.16■■□□□ 1.78
SFSWAP-204ENST00000535399 FRMPD4Q14CM0 1322 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 DNM1LO00429 736 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 ADAMTS4O75173 837 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 COL6A1P12109 1028 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 SMPD1P17405 629 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 NAPAP54920 295 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 TMEM63BQ5T3F8 832 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 GJC2Q5T442 439 aaPredicted RBP26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 IL31RAQ8NI17 732 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 SMARCC2Q8TAQ2 1214 aa26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 UPF2Q9HAU5 1272 aaKnown RBP26.15■■□□□ 1.78
SFSWAP-204ENST00000535399 SYNRGQ9UMZ2 1314 aa26.14■■□□□ 1.78
SFSWAP-204ENST00000535399 STXBP2Q15833 593 aa26.14■■□□□ 1.78
SFSWAP-204ENST00000535399 UBE2SQ16763 222 aa26.14■■□□□ 1.78
SFSWAP-204ENST00000535399 NOL8Q76FK4 1167 aaKnown RBP26.14■■□□□ 1.78
SFSWAP-204ENST00000535399 UPF3AQ9H1J1 476 aaKnown RBP26.14■■□□□ 1.78
SFSWAP-204ENST00000535399 C11orf49Q9H6J7 331 aa26.14■■□□□ 1.78
SFSWAP-204ENST00000535399 CPLX1O14810 134 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 LARGE1O95461 756 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 PTGS1P23219 599 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 AKAP17AQ02040 695 aaKnown RBP26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 PGM5Q15124 567 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 ME3Q16798 604 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 VSIG10LQ86VR7 867 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 KLHDC9Q8NEP7 349 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 WDR11Q9BZH6 1224 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 RIC8AQ9NPQ8 531 aa26.13■■□□□ 1.77
SFSWAP-204ENST00000535399 FRMPD3Q5JV73 1810 aa26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 EIF3JO75822 258 aaKnown RBP26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 MYCNP04198 464 aaPredicted RBP26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 GJA9P57773 515 aa26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 NKX3-2P78367 333 aa26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 IRX5P78411 483 aaPredicted RBP26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 SSRP1Q08945 709 aaKnown RBP26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 DUSP28Q4G0W2 176 aa26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 CPLX2Q6PUV4 134 aaKnown RBP26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 RNF180Q86T96 592 aa26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 BACH2Q9BYV9 841 aa26.12■■□□□ 1.77
SFSWAP-204ENST00000535399 MYADML2A6NDP7 307 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 SMCO2A6NFE2 343 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 KBTBD13C9JR72 458 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 CTAGE5O15320 804 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 ADCY7P51828 1080 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 TLK2Q86UE8 772 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 TEX2Q8IWB9 1127 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 TRIM22Q8IYM9 498 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 SCFD2Q8WU76 684 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 TBC1D32Q96NH3 1257 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 Q9Y3F1 56 aa26.11■■□□□ 1.77
SFSWAP-204ENST00000535399 ARIH2O95376 493 aa26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 MYCLP12524 364 aaPredicted RBP26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 CST5P28325 142 aaPredicted RBP26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 CCND2P30279 289 aa26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 CCSAPQ6IQ19 270 aaPredicted RBP26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 CCDC62Q6P9F0 684 aa26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 NECAB1Q8N987 351 aa26.1■■□□□ 1.77
SFSWAP-204ENST00000535399 ESYT2A0FGR8 921 aa26.09■■□□□ 1.77
SFSWAP-204ENST00000535399 DYNC1LI2O43237 492 aaPredicted RBP26.09■■□□□ 1.77
SFSWAP-204ENST00000535399 RGS20O76081 388 aa26.09■■□□□ 1.77
SFSWAP-204ENST00000535399 CTDNEP1O95476 244 aa26.09■■□□□ 1.77
SFSWAP-204ENST00000535399 SEPT14Q6ZU15 432 aa26.09■■□□□ 1.77
SFSWAP-204ENST00000535399 GTF3C6Q969F1 213 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms