RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 SCFD2Q8WU76 684 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 ESR2Q92731 530 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 MTG1Q9BT17 334 aaPredicted RBP14.7□□□□□ -0.06
USF1-211ENST00000534633 MAF1Q9H063 256 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 SLC28A3Q9HAS3 691 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 GPHNQ9NQX3 736 aaPredicted RBP14.7□□□□□ -0.06
USF1-211ENST00000534633 CHD7Q9P2D1 2997 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 MYH7BA7E2Y1 1941 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 TNKSO95271 1327 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 KPNA6O60684 536 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 CCDC178Q5BJE1 867 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 RGS22Q8NE09 1264 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 SCLYQ96I15 445 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 NKX2-4Q9H2Z4 354 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 TRMT13Q9NUP7 481 aaKnown RBP14.69□□□□□ -0.06
USF1-211ENST00000534633 SLC4A7Q9Y6M7 1214 aa14.69□□□□□ -0.06
USF1-211ENST00000534633 NEDD4P46934 1319 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 MUC3AQ02505 3323 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 A6NJR5 290 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 ZNF213O14771 459 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 CHMLP26374 656 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 NFRKBQ6P4R8 1299 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 CWC27Q6UX04 472 aaKnown RBP14.68□□□□□ -0.06
USF1-211ENST00000534633 VWCEQ96DN2 955 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 YBX2Q9Y2T7 364 aaKnown RBP14.68□□□□□ -0.06
USF1-211ENST00000534633 TET1Q8NFU7 2136 aa14.68□□□□□ -0.06
USF1-211ENST00000534633 PTPRSQ13332 1948 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 CYP2C9P11712 490 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 PTPN11Q06124 597 aaPredicted RBP14.67□□□□□ -0.06
USF1-211ENST00000534633 ADGRE1Q14246 886 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 NBPF20Q3BBV1 942 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 USH1GQ495M9 461 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 FAM47CQ5HY64 1035 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 IQCA1Q86XH1 822 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 PNMA1Q8ND90 353 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
USF1-211ENST00000534633 ZKSCAN3Q9BRR0 538 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 PCDHA11Q9Y5I1 949 aa14.67□□□□□ -0.06
USF1-211ENST00000534633 ZBBXA8MT70 800 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 GOLGA8HP0CJ92 632 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 TXNP10599 105 aaKnown RBP14.66□□□□□ -0.06
USF1-211ENST00000534633 ATP2A2P16615 1042 aaKnown RBP14.66□□□□□ -0.06
USF1-211ENST00000534633 RFC2P35250 354 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 PPM1EQ8WY54 764 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 ANKS1AQ92625 1134 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 COPS5Q92905 334 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 PRDM6Q9NQX0 595 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 THEGQ9P2T0 379 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 ABCB11O95342 1321 aa14.66□□□□□ -0.06
USF1-211ENST00000534633 TRANK1O15050 2925 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 REV3LO60673 3130 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 HIP1O00291 1037 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 KDM4AO75164 1064 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 ACTN1P12814 892 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 IGFBP4P22692 258 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 RABGGTBP53611 331 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 CDC37Q16543 378 aaPredicted RBP14.65□□□□□ -0.06
USF1-211ENST00000534633 ASPRV1Q53RT3 343 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 UBA5Q9GZZ9 404 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 CPVLQ9H3G5 476 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 KAT14Q9H8E8 782 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 DIAPH3Q9NSV4 1193 aa14.65□□□□□ -0.06
USF1-211ENST00000534633 ARIH2O95376 493 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 BFSP2Q13515 415 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 CCDC62Q6P9F0 684 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 DEFB128Q7Z7B8 93 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 ADGRF4Q8IZF3 695 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 RETREG2Q8NC44 543 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 SYTL5Q8TDW5 730 aaPredicted RBP14.64□□□□□ -0.07
USF1-211ENST00000534633 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
USF1-211ENST00000534633 SLC9A7Q96T83 725 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 NCOR1O75376 2440 aa14.64□□□□□ -0.07
USF1-211ENST00000534633 B4E1Z4 1266 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 TNFRSF10AO00220 468 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 GH1P01241 217 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 IQCF3P0C7M6 154 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 MYOGP15173 224 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 CCDC85BQ15834 202 aaPredicted RBP14.63□□□□□ -0.07
USF1-211ENST00000534633 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
USF1-211ENST00000534633 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 MCF2L2Q86YR7 1114 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 ENAHQ8N8S7 591 aaPredicted RBP14.63□□□□□ -0.07
USF1-211ENST00000534633 ASB2Q96Q27 587 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 TAAR1Q96RJ0 339 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 IWS1Q96ST2 819 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 ZSCAN10Q96SZ4 725 aaPredicted RBP14.63□□□□□ -0.07
USF1-211ENST00000534633 DSCC1Q9BVC3 393 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 ZSWIM5Q9P217 1185 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 NOD1Q9Y239 953 aa14.63□□□□□ -0.07
USF1-211ENST00000534633 MRPL11Q9Y3B7 192 aaKnown RBP14.63□□□□□ -0.07
USF1-211ENST00000534633 TCF20Q9UGU0 1960 aaKnown RBP14.62□□□□□ -0.07
USF1-211ENST00000534633 SGSM2O43147 1006 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 MMP3P08254 477 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 PARP1P09874 1014 aaKnown RBP14.62□□□□□ -0.07
USF1-211ENST00000534633 MRPS5P82675 430 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms