RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 MORC4Q8TE76 937 aa27.8■■■□□ 2.04
SIPA1-210ENST00000534406 GLT8D2Q9H1C3 349 aa27.8■■■□□ 2.04
SIPA1-210ENST00000534406 PAK6Q9NQU5 681 aaPredicted RBP27.8■■■□□ 2.04
SIPA1-210ENST00000534406 PXMP2Q9NR77 195 aa27.8■■■□□ 2.04
SIPA1-210ENST00000534406 ESYT2A0FGR8 921 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 MEIS2O14770 477 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 EDNRBP24530 442 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 PDE4DQ08499 809 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 PRAMEF19Q5SWL8 479 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 ARHGEF16Q5VV41 709 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 USP17L6PQ6QN14 398 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 ABHD16BQ9H3Z7 469 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 RIC8AQ9NPQ8 531 aa27.79■■■□□ 2.04
SIPA1-210ENST00000534406 ORC3Q9UBD5 711 aaPredicted RBP27.79■■■□□ 2.04
SIPA1-210ENST00000534406 ZHX1Q9UKY1 873 aaPredicted RBP27.79■■■□□ 2.04
SIPA1-210ENST00000534406 SMCO2A6NFE2 343 aa27.78■■■□□ 2.04
SIPA1-210ENST00000534406 EIF2AK2P19525 551 aaKnown RBP27.78■■■□□ 2.04
SIPA1-210ENST00000534406 CNGA1P29973 690 aa27.78■■■□□ 2.04
SIPA1-210ENST00000534406 UBE2SQ16763 222 aa27.78■■■□□ 2.04
SIPA1-210ENST00000534406 VPS54Q9P1Q0 977 aa27.78■■■□□ 2.04
SIPA1-210ENST00000534406 DDX49Q9Y6V7 483 aaKnown RBP27.78■■■□□ 2.04
SIPA1-210ENST00000534406 FRMPD3Q5JV73 1810 aa27.78■■■□□ 2.04
SIPA1-210ENST00000534406 ZNF865P0CJ78 1059 aaPredicted RBP27.77■■■□□ 2.04
SIPA1-210ENST00000534406 IWS1Q96ST2 819 aa27.77■■■□□ 2.04
SIPA1-210ENST00000534406 SH3GLB2Q9NR46 395 aa27.77■■■□□ 2.04
SIPA1-210ENST00000534406 FRMPD4Q14CM0 1322 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 SEPT4O43236 478 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 GJB1P08034 283 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 ACVR2BQ13705 512 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 FBXO16Q8IX29 292 aaPredicted RBP27.76■■■□□ 2.03
SIPA1-210ENST00000534406 WASF1Q92558 559 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 DEFB118Q96PH6 123 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 PDCD2LQ9BRP1 358 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 LLPHQ9BRT6 129 aaKnown RBP27.76■■■□□ 2.03
SIPA1-210ENST00000534406 KATNBL1Q9H079 304 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 ZMYND12Q9H0C1 365 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 C6orf50Q9HD87 102 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 VTA1Q9NP79 307 aa27.76■■■□□ 2.03
SIPA1-210ENST00000534406 JAK2O60674 1132 aa27.75■■■□□ 2.03
SIPA1-210ENST00000534406 MSCO60682 206 aa27.75■■■□□ 2.03
SIPA1-210ENST00000534406 FAM177A1Q8N128 213 aaPredicted RBP27.75■■■□□ 2.03
SIPA1-210ENST00000534406 TMX3Q96JJ7 454 aa27.75■■■□□ 2.03
SIPA1-210ENST00000534406 AIFM3Q96NN9 605 aa27.75■■■□□ 2.03
SIPA1-210ENST00000534406 DDX20Q9UHI6 824 aaKnown RBP27.75■■■□□ 2.03
SIPA1-210ENST00000534406 SPDYE3A6NKU9 549 aa27.74■■■□□ 2.03
SIPA1-210ENST00000534406 DTNBO60941 627 aa27.74■■■□□ 2.03
SIPA1-210ENST00000534406 AKR1A1P14550 325 aa27.74■■■□□ 2.03
SIPA1-210ENST00000534406 GNA11P29992 359 aa27.74■■■□□ 2.03
SIPA1-210ENST00000534406 EEPD1Q7L9B9 569 aa27.74■■■□□ 2.03
SIPA1-210ENST00000534406 NR3C2P08235 984 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 XBP1P17861 261 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 SOX10P56693 466 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 PGM5Q15124 567 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 BICD2Q8TD16 824 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 SHISA4Q96DD7 197 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 EHMT1Q9H9B1 1298 aa27.73■■■□□ 2.03
SIPA1-210ENST00000534406 POTEFA5A3E0 1075 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 FDPSP14324 419 aaKnown RBP27.72■■■□□ 2.03
SIPA1-210ENST00000534406 CCND2P30279 289 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 GJA8P48165 433 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 NLRP5P59047 1200 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 AP3B2Q13367 1082 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 STXBP2Q15833 593 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 REXO1Q8N1G1 1221 aaKnown RBP27.72■■■□□ 2.03
SIPA1-210ENST00000534406 IL31RAQ8NI17 732 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 U2AF1L4Q8WU68 220 aaKnown RBP27.72■■■□□ 2.03
SIPA1-210ENST00000534406 ALG1Q9BT22 464 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 FAM184BQ9ULE4 1060 aa27.72■■■□□ 2.03
SIPA1-210ENST00000534406 KIAA1217Q5T5P2 1943 aa27.71■■■□□ 2.03
SIPA1-210ENST00000534406 FOSP01100 380 aaPredicted RBP27.71■■■□□ 2.03
SIPA1-210ENST00000534406 HMGN5P82970 282 aaKnown RBP27.71■■■□□ 2.03
SIPA1-210ENST00000534406 CCDC144BQ3MJ40 725 aa27.71■■■□□ 2.03
SIPA1-210ENST00000534406 SGPL1O95470 568 aa27.7■■■□□ 2.02
SIPA1-210ENST00000534406 MYCLP12524 364 aaPredicted RBP27.7■■■□□ 2.02
SIPA1-210ENST00000534406 CLK2P49760 499 aaKnown RBP27.7■■■□□ 2.02
SIPA1-210ENST00000534406 MCTP2Q6DN12 878 aa27.7■■■□□ 2.02
SIPA1-210ENST00000534406 PCDHA6Q9UN73 950 aa27.7■■■□□ 2.02
SIPA1-210ENST00000534406 PCDHA8Q9Y5H6 950 aa27.7■■■□□ 2.02
SIPA1-210ENST00000534406 RARBP10826 455 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 ANO1Q5XXA6 986 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 LHX8Q68G74 356 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 GALNT17Q6IS24 598 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 TAPT1Q6NXT6 567 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 ANO3Q9BYT9 981 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 CRISPLD2Q9H0B8 497 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 TMEM260Q9NX78 707 aa27.69■■■□□ 2.02
SIPA1-210ENST00000534406 EIF3JO75822 258 aaKnown RBP27.68■■■□□ 2.02
SIPA1-210ENST00000534406 CAPN2P17655 700 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 ADCYAP1R1P41586 468 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 VSIG10LQ86VR7 867 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 DAGLBQ8NCG7 672 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 SCFD2Q8WU76 684 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 LENG1Q96BZ8 264 aaPredicted RBP27.68■■■□□ 2.02
SIPA1-210ENST00000534406 PGBD1Q96JS3 809 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 PDGFCQ9NRA1 345 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 PCDHA4Q9UN74 947 aa27.68■■■□□ 2.02
SIPA1-210ENST00000534406 TFRCP02786 760 aaKnown RBP27.67■■■□□ 2.02
SIPA1-210ENST00000534406 JAKMIP3Q5VZ66 844 aa27.67■■■□□ 2.02
SIPA1-210ENST00000534406 PCNX4Q63HM2 1172 aa27.67■■■□□ 2.02
SIPA1-210ENST00000534406 XRRA1Q6P2D8 792 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms