RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 RWDD2AQ9UIY3 292 aa18.94■□□□□ 0.62
PHRF1-206ENST00000534320 RAD17O75943 681 aa18.94■□□□□ 0.62
PHRF1-206ENST00000534320 POLR2FP61218 127 aaKnown RBP18.94■□□□□ 0.62
PHRF1-206ENST00000534320 MAP3K9P80192 1104 aa18.94■□□□□ 0.62
PHRF1-206ENST00000534320 CAMTA2O94983 1202 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 FOXP4Q8IVH2 680 aaPredicted RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 GPR161Q8N6U8 529 aaKnown RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 SMIM23A6NLE4 172 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 ATP11AP98196 1134 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 SREK1Q8WXA9 508 aaKnown RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 RPGRIP1Q96KN7 1286 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 IQCGQ9H095 443 aaKnown RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 PLCG1P19174 1290 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 ERCC6LQ2NKX8 1250 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 SYDE2Q5VT97 1194 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 FMR1NBQ8N0W7 255 aaPredicted RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 RBL2Q08999 1139 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 UBE2SQ16763 222 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 ZNF579Q8NAF0 562 aaKnown RBP18.93■□□□□ 0.62
PHRF1-206ENST00000534320 OXER1Q8TDS5 423 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 MROH7-TTC4A0A0A0MT08 1334 aa18.93■□□□□ 0.62
PHRF1-206ENST00000534320 U2AF1L4Q8WU68 220 aaKnown RBP18.92■□□□□ 0.62
PHRF1-206ENST00000534320 CCDC97Q96F63 343 aaPredicted RBP18.92■□□□□ 0.62
PHRF1-206ENST00000534320 ZNF512BQ96KM6 892 aaPredicted RBP18.92■□□□□ 0.62
PHRF1-206ENST00000534320 SELENOSQ9BQE4 189 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 SPATA31A1Q5TZJ5 1347 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 AFAP1L1Q8TED9 768 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 ARHGAP25P42331 645 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 VSTM4Q8IW00 320 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 KLHL7Q8IXQ5 586 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 SLC44A5Q8NCS7 719 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 ANAPC4Q9UJX5 808 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 STAT2P52630 851 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 UBXN2AP68543 259 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 NFIXQ14938 502 aa18.92■□□□□ 0.62
PHRF1-206ENST00000534320 UTP11Q9Y3A2 253 aaKnown RBP18.92■□□□□ 0.62
PHRF1-206ENST00000534320 ACTN4O43707 911 aaKnown RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 CDC37Q16543 378 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 CCDC110Q8TBZ0 833 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 GJA10Q969M2 543 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 RIMS1Q86UR5 1692 aaKnown RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 ATP1A3P13637 1013 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 DEPTORQ8TB45 409 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 RIC8AQ9NPQ8 531 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 DISC1Q9NRI5 854 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 TNNI1P19237 187 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 LRRC41Q15345 812 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 MARCH10Q8NA82 808 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 GLG1Q92896 1179 aa18.91■□□□□ 0.62
PHRF1-206ENST00000534320 GJD4Q96KN9 370 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
PHRF1-206ENST00000534320 ODR4Q5SWX8 454 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 SARM1Q6SZW1 724 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 TSNARE1Q96NA8 513 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 ZNF577Q9BSK1 485 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 PAGR1Q9BTK6 254 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 VCXQ9H320 206 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 NDUFAB1O14561 156 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 BUB1BO60566 1050 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-206ENST00000534320 GPSM2P81274 684 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 SLC27A3Q5K4L6 730 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 STMN2Q93045 179 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 TRIM7Q9C029 511 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 MKRN1Q9UHC7 482 aaKnown RBP18.9■□□□□ 0.62
PHRF1-206ENST00000534320 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 CRKP46108 304 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 EFCAB8A8MWE9 144 aa18.9■□□□□ 0.62
PHRF1-206ENST00000534320 ORC4O43929 436 aa18.89■□□□□ 0.62
PHRF1-206ENST00000534320 NR2F2P24468 414 aa18.89■□□□□ 0.62
PHRF1-206ENST00000534320 CCNE1P24864 410 aa18.89■□□□□ 0.62
PHRF1-206ENST00000534320 N4BP1O75113 896 aaKnown RBP18.89■□□□□ 0.61
PHRF1-206ENST00000534320 TSNAXIP1Q2TAA8 658 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 CACNB3P54284 484 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 KMT5BQ4FZB7 885 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 AP1ARQ63HQ0 302 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 TMEM179Q6ZVK1 233 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 SMIM5Q71RC9 77 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 ANKRD35Q8N283 1001 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 CEP120Q8N960 986 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 RETREG2Q8NC44 543 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 MYO1AQ9UBC5 1043 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 HYOU1Q9Y4L1 999 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 FKBP3Q00688 224 aaKnown RBP18.89■□□□□ 0.61
PHRF1-206ENST00000534320 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.61
PHRF1-206ENST00000534320 WDR11Q9BZH6 1224 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 TRIM31Q9BZY9 425 aa18.89■□□□□ 0.61
PHRF1-206ENST00000534320 KIF28PB7ZC32 967 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 GRM4Q14833 912 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 MAN2A1Q16706 1144 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 EXOC3L4Q17RC7 722 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 BRDTQ58F21 947 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-206ENST00000534320 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
PHRF1-206ENST00000534320 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 CPVLQ9H3G5 476 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 MLXIPQ9HAP2 919 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 RFC1P35251 1148 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms