RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 UBE2SQ16763 222 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 TMED8Q6PL24 325 aaPredicted RBP19.23■□□□□ 0.67
SIPA1-209ENST00000534313 TBC1D7Q9P0N9 293 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 CAPN6Q9Y6Q1 641 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 SSBP05455 408 aaKnown RBP eCLIP19.23■□□□□ 0.67
SIPA1-209ENST00000534313 TNNI2P48788 182 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 GALNT17Q6IS24 598 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 KCNK18Q7Z418 384 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 C7orf25Q9BPX7 421 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 TANGO6Q9C0B7 1094 aa19.23■□□□□ 0.67
SIPA1-209ENST00000534313 COL22A1Q8NFW1 1626 aaPredicted RBP19.23■□□□□ 0.67
SIPA1-209ENST00000534313 LAD1O00515 517 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 MOCS3O95396 460 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 KIF5AQ12840 1032 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 GRAPQ13588 217 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 EZH2Q15910 746 aaKnown RBP19.22■□□□□ 0.67
SIPA1-209ENST00000534313 CALCRLQ16602 461 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 SV2BQ7L1I2 683 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 GPATCH11Q8N954 259 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 GRAPLQ8TC17 118 aaPredicted RBP19.22■□□□□ 0.67
SIPA1-209ENST00000534313 EXOC4Q96A65 974 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 DEF6Q9H4E7 631 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 BLOC1S4Q9NUP1 217 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 LAMB1P07942 1786 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 FOXR1Q6PIV2 292 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.22■□□□□ 0.67
SIPA1-209ENST00000534313 BARGINQ6ZT62 677 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 GOLGA5Q8TBA6 731 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 CD209Q9NNX6 404 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 SPA17Q15506 151 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 MFSD14BQ5SR56 506 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 GBP3Q9H0R5 595 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 ACBD3Q9H3P7 528 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 ARHGAP20Q9P2F6 1191 aa19.22■□□□□ 0.67
SIPA1-209ENST00000534313 LDHCP07864 332 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 ACTN2P35609 894 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 ENOX2Q16206 610 aaKnown RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 CNNM4Q6P4Q7 775 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 RRAGAQ7L523 313 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 SECISBP2LQ93073 1101 aaKnown RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 AK8Q96MA6 479 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 PNMA5Q96PV4 448 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 MYL1P05976 194 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 PAPD7Q5XG87 772 aaKnown RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 CNBD1Q8NA66 436 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 NOC3LQ8WTT2 800 aaKnown RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 SNED1Q8TER0 1413 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 RREB1Q92766 1687 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 EIF4A3P38919 411 aaKnown RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 AMPD3Q01432 767 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 C16orf86Q6ZW13 317 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 FAM114A1Q8IWE2 563 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 NEDD1Q8NHV4 660 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 SNX29Q8TEQ0 813 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 COG1Q8WTW3 980 aa19.21■□□□□ 0.67
SIPA1-209ENST00000534313 IFIH1Q9BYX4 1025 aaKnown RBP19.21■□□□□ 0.67
SIPA1-209ENST00000534313 WNK3Q9BYP7 1800 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 EIF3CLB5ME19 914 aaKnown RBP19.2■□□□□ 0.66
SIPA1-209ENST00000534313 NCK2O43639 380 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 PPP4CP60510 307 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 HDAC7Q8WUI4 952 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 NGLY1Q96IV0 654 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 EIF3CQ99613 913 aaKnown RBP19.2■□□□□ 0.66
SIPA1-209ENST00000534313 NUP58Q9BVL2 599 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 NDST4Q9H3R1 872 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 FAM204AQ9H8W3 233 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 CASZ1Q86V15 1759 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 SLC16A2P36021 539 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 APBA1Q02410 837 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 TMC4Q7Z404 712 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 LARP4BQ92615 738 aaKnown RBP19.2■□□□□ 0.66
SIPA1-209ENST00000534313 NLRC4Q9NPP4 1024 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 LEMD3Q9Y2U8 911 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 AKR1B10O60218 316 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 SLC7A5Q01650 507 aa19.2■□□□□ 0.66
SIPA1-209ENST00000534313 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 LRRC53A6NM62 1247 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 TTC31Q49AM3 519 aaPredicted RBP19.19■□□□□ 0.66
SIPA1-209ENST00000534313 VWA3BQ502W6 1294 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 RPGRQ92834 1020 aaKnown RBP19.19■□□□□ 0.66
SIPA1-209ENST00000534313 LZTS2Q9BRK4 669 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 CUEDC2Q9H467 287 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 VAV2P52735 878 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 ECM1Q16610 540 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 TTBK2Q6IQ55 1244 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 WDR93Q6P2C0 686 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 NFRKBQ6P4R8 1299 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 ZNF287Q9HBT7 754 aa19.19■□□□□ 0.66
SIPA1-209ENST00000534313 RIMBP2O15034 1052 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 BUB1O43683 1085 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 EDIL3O43854 480 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 MARCH6O60337 910 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 RNF40O75150 1001 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 IVLP07476 585 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 PDHBP11177 359 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 KIF11P52732 1056 aa19.18■□□□□ 0.66
SIPA1-209ENST00000534313 NAP1L1P55209 391 aaKnown RBP19.18■□□□□ 0.66
SIPA1-209ENST00000534313 CCDC88AQ3V6T2 1871 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms