RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 GPHNQ9NQX3 736 aaPredicted RBP21.17■□□□□ 0.98
UBXN1-216ENST00000533908 COL20A1Q9P218 1284 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 PNMA2Q9UL42 364 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 PCDHA11Q9Y5I1 949 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 ZBBXA8MT70 800 aa21.16■□□□□ 0.98
UBXN1-216ENST00000533908 RBAK-RBAKDNI3L0D1 243 aa21.16■□□□□ 0.98
UBXN1-216ENST00000533908 NKRFO15226 690 aaKnown RBP eCLIP21.16■□□□□ 0.98
UBXN1-216ENST00000533908 IGHDP01880 384 aa21.16■□□□□ 0.98
UBXN1-216ENST00000533908 PLEKHM2Q8IWE5 1019 aa21.16■□□□□ 0.98
UBXN1-216ENST00000533908 ESR2Q92731 530 aa21.16■□□□□ 0.98
UBXN1-216ENST00000533908 KDM4AO75164 1064 aa21.15■□□□□ 0.98
UBXN1-216ENST00000533908 IQCF3P0C7M6 154 aa21.15■□□□□ 0.98
UBXN1-216ENST00000533908 ATP2A2P16615 1042 aaKnown RBP21.15■□□□□ 0.98
UBXN1-216ENST00000533908 GPATCH4Q5T3I0 446 aaKnown RBP21.15■□□□□ 0.98
UBXN1-216ENST00000533908 NFRKBQ6P4R8 1299 aa21.15■□□□□ 0.98
UBXN1-216ENST00000533908 ATXN2LQ8WWM7 1075 aaKnown RBP21.15■□□□□ 0.98
UBXN1-216ENST00000533908 ANKS1AQ92625 1134 aa21.15■□□□□ 0.98
UBXN1-216ENST00000533908 ASB2Q96Q27 587 aa21.15■□□□□ 0.98
UBXN1-216ENST00000533908 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
UBXN1-216ENST00000533908 RFXAPO00287 272 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 ZNF213O14771 459 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 KPNA6O60684 536 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 CDC37Q16543 378 aaPredicted RBP21.14■□□□□ 0.97
UBXN1-216ENST00000533908 PPP2R2DQ66LE6 453 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 CWC27Q6UX04 472 aaKnown RBP21.14■□□□□ 0.97
UBXN1-216ENST00000533908 ADGRF4Q8IZF3 695 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 PNMA1Q8ND90 353 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 SYTL5Q8TDW5 730 aaPredicted RBP21.14■□□□□ 0.97
UBXN1-216ENST00000533908 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 OSBPL3Q9H4L5 887 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 THEGQ9P2T0 379 aa21.14■□□□□ 0.97
UBXN1-216ENST00000533908 B4E1Z4 1266 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 ARHGEF15O94989 841 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 PFKMP08237 780 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 GPNMBQ14956 572 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 LY6KQ17RY6 165 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 CHD1LQ86WJ1 897 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 AFG1LQ8WV93 481 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 ZSWIM5Q9P217 1185 aa21.13■□□□□ 0.97
UBXN1-216ENST00000533908 TNFRSF10AO00220 468 aa21.12■□□□□ 0.97
UBXN1-216ENST00000533908 CHMP4BP1P59074 171 aa21.12■□□□□ 0.97
UBXN1-216ENST00000533908 PTPN11Q06124 597 aaPredicted RBP21.12■□□□□ 0.97
UBXN1-216ENST00000533908 BRDTQ58F21 947 aaPredicted RBP21.12■□□□□ 0.97
UBXN1-216ENST00000533908 SEPT14Q6ZU15 432 aa21.12■□□□□ 0.97
UBXN1-216ENST00000533908 ENAHQ8N8S7 591 aaPredicted RBP21.12■□□□□ 0.97
UBXN1-216ENST00000533908 KAT2BQ92831 832 aa21.12■□□□□ 0.97
UBXN1-216ENST00000533908 MPHOSPH6Q99547 160 aaKnown RBP21.12■□□□□ 0.97
UBXN1-216ENST00000533908 RAD50Q92878 1312 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 PITPNM1O00562 1244 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 CA3P07451 260 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
UBXN1-216ENST00000533908 NUCB1Q02818 461 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 ARHGAP1Q07960 439 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 QRICH1Q2TAL8 776 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 ZSCAN10Q96SZ4 725 aaPredicted RBP21.11■□□□□ 0.97
UBXN1-216ENST00000533908 JMJD4Q9H9V9 463 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 CERS4Q9HA82 394 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 VAT1LQ9HCJ6 419 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 REV3LO60673 3130 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 TET1Q8NFU7 2136 aa21.11■□□□□ 0.97
UBXN1-216ENST00000533908 ABCB11O95342 1321 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 EPOPA6NHQ4 379 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 B4DLN1 442 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 MMP3P08254 477 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 RFC2P35250 354 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 MRPL12P52815 198 aaKnown RBP21.1■□□□□ 0.97
UBXN1-216ENST00000533908 MRPS5P82675 430 aaKnown RBP21.1■□□□□ 0.97
UBXN1-216ENST00000533908 TMEM67Q5HYA8 995 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 GDF6Q6KF10 455 aaPredicted RBP21.1■□□□□ 0.97
UBXN1-216ENST00000533908 IQCA1Q86XH1 822 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 RETREG2Q8NC44 543 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 NSUN6Q8TEA1 469 aaKnown RBP21.1■□□□□ 0.97
UBXN1-216ENST00000533908 IL25Q9H293 177 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 RWDD1Q9H446 243 aaPredicted RBP21.1■□□□□ 0.97
UBXN1-216ENST00000533908 KAT14Q9H8E8 782 aa21.1■□□□□ 0.97
UBXN1-216ENST00000533908 MUC3AQ02505 3323 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 OPLAHO14841 1288 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 PTGISQ16647 500 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 CHST3Q7LGC8 479 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 STAG2Q8N3U4 1231 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 ADAMTS19Q8TE59 1207 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 DHX38Q92620 1227 aaKnown RBP21.09■□□□□ 0.97
UBXN1-216ENST00000533908 RMDN3Q96TC7 470 aa21.09■□□□□ 0.97
UBXN1-216ENST00000533908 FTOQ9C0B1 505 aaKnown RBP eCLIP21.09■□□□□ 0.97
UBXN1-216ENST00000533908 GH1P01241 217 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 ACTN1P12814 892 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 BFSP2Q13515 415 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 STXBP2Q15833 593 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 KRT40Q6A162 431 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 SPRED2Q7Z698 418 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 FBXO11Q86XK2 927 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 MICALL1Q8N3F8 863 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 PHOSPHO2Q8TCD6 241 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 IWS1Q96ST2 819 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 MAF1Q9H063 256 aa21.08■□□□□ 0.97
UBXN1-216ENST00000533908 DDX41Q9UJV9 622 aaKnown RBP21.08■□□□□ 0.97
UBXN1-216ENST00000533908 MTCH2Q9Y6C9 303 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms