RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 PRAMEF19Q5SWL8 479 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 ARHGEF16Q5VV41 709 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 MORC4Q8TE76 937 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
SF3B2-214ENST00000533595 RNF208Q9H0X6 261 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 ABHD16BQ9H3Z7 469 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 PXMP2Q9NR77 195 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
SF3B2-214ENST00000533595 KIAA0100Q14667 2235 aaKnown RBP16.75■□□□□ 0.27
SF3B2-214ENST00000533595 JAK2O60674 1132 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 DTNBO60941 627 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 EDNRBP24530 442 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 CNGA1P29973 690 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 CCND3P30281 292 aaPredicted RBP16.74■□□□□ 0.27
SF3B2-214ENST00000533595 PDE4DQ08499 809 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 UBE2SQ16763 222 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 TRPV1Q8NER1 839 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 WASF1Q92558 559 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 IWS1Q96ST2 819 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 TMEM106CQ9BVX2 250 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.74■□□□□ 0.276e-11■■□□□ 13.7
SF3B2-214ENST00000533595 C6orf50Q9HD87 102 aa16.74■□□□□ 0.27
SF3B2-214ENST00000533595 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
SF3B2-214ENST00000533595 CCDC85CA6NKD9 419 aa16.73■□□□□ 0.27
SF3B2-214ENST00000533595 ZNF865P0CJ78 1059 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-214ENST00000533595 FDPSP14324 419 aaKnown RBP16.73■□□□□ 0.27
SF3B2-214ENST00000533595 EIF2AK2P19525 551 aaKnown RBP16.73■□□□□ 0.27
SF3B2-214ENST00000533595 GNA11P29992 359 aa16.73■□□□□ 0.27
SF3B2-214ENST00000533595 ACVR2BQ13705 512 aa16.73■□□□□ 0.27
SF3B2-214ENST00000533595 FAM177A1Q8N128 213 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-214ENST00000533595 AIFM3Q96NN9 605 aa16.73■□□□□ 0.27
SF3B2-214ENST00000533595 PAK6Q9NQU5 681 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-214ENST00000533595 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-214ENST00000533595 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 GJB1P08034 283 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 NR3C2P08235 984 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 XBP1P17861 261 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 NLRP5P59047 1200 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 BICD2Q8TD16 824 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 ALG1Q9BT22 464 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 VTA1Q9NP79 307 aa16.72■□□□□ 0.27
SF3B2-214ENST00000533595 SEPT4O43236 478 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 FOSP01100 380 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-214ENST00000533595 HMGN5P82970 282 aaKnown RBP16.71■□□□□ 0.27
SF3B2-214ENST00000533595 PGM5Q15124 567 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 STXBP2Q15833 593 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 EEPD1Q7L9B9 569 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-214ENST00000533595 REXO1Q8N1G1 1221 aaKnown RBP16.71■□□□□ 0.27
SF3B2-214ENST00000533595 DEFB118Q96PH6 123 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 PCDHA6Q9UN73 950 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 PCDHA8Q9Y5H6 950 aa16.71■□□□□ 0.27
SF3B2-214ENST00000533595 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 MSCO60682 206 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 MYCLP12524 364 aaPredicted RBP16.7■□□□□ 0.26
SF3B2-214ENST00000533595 AKR1A1P14550 325 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 CCND2P30279 289 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 CLK2P49760 499 aaKnown RBP16.7■□□□□ 0.26
SF3B2-214ENST00000533595 AP3B2Q13367 1082 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 CCDC144BQ3MJ40 725 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 MCTP2Q6DN12 878 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 GALNT17Q6IS24 598 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 EHMT1Q9H9B1 1298 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
SF3B2-214ENST00000533595 FAM184BQ9ULE4 1060 aa16.7■□□□□ 0.26
SF3B2-214ENST00000533595 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
SF3B2-214ENST00000533595 JAKMIP3Q5VZ66 844 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 TAPT1Q6NXT6 567 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 VSIG10LQ86VR7 867 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 IL31RAQ8NI17 732 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
SF3B2-214ENST00000533595 SNX21Q969T3 373 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 PHF20Q9BVI0 1012 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 ANO3Q9BYT9 981 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 TMEM260Q9NX78 707 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 PCDHA4Q9UN74 947 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 LRRC37A2A6NM11 1700 aa16.69■□□□□ 0.26
SF3B2-214ENST00000533595 ADAMTS3O15072 1205 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 SGPL1O95470 568 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 GJA8P48165 433 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 TRIM29Q14134 588 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 PCNX4Q63HM2 1172 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 LHX8Q68G74 356 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 DAGLBQ8NCG7 672 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 PGBD1Q96JS3 809 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 GJB4Q9NTQ9 266 aa16.68■□□□□ 0.26
SF3B2-214ENST00000533595 RBM47A0AV96 593 aaKnown RBP16.67■□□□□ 0.26
SF3B2-214ENST00000533595 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms