RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TSPY8P0CW00 308 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 EIF4A3P38919 411 aaKnown RBP18.46■□□□□ 0.55
CTSB-228ENST00000533455 RPS8P62241 208 aaKnown RBP18.46■□□□□ 0.55
CTSB-228ENST00000533455 PPFIA1Q13136 1202 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 LETM2Q2VYF4 491 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 DNAJC21Q5F1R6 531 aaKnown RBP18.46■□□□□ 0.55
CTSB-228ENST00000533455 GBP6Q6ZN66 633 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 SND1Q7KZF4 910 aaKnown RBP eCLIP18.46■□□□□ 0.555e-15■■■■□ 19.9
CTSB-228ENST00000533455 USP17L1Q7RTZ2 530 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 DZIP1Q86YF9 867 aaKnown RBP18.46■□□□□ 0.55
CTSB-228ENST00000533455 C2CD5Q86YS7 1000 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 CALML4Q96GE6 196 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 TMEM47Q9BQJ4 181 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 LRRC1Q9BTT6 524 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 MKNK2Q9HBH9 465 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 EPHB6O15197 1021 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 CCNT1O60563 726 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 EPB41P11171 864 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 NOP2P46087 812 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 EPHB4P54760 987 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 NAPAP54920 295 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 EZH2Q15910 746 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 FOXR2Q6PJQ5 311 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 UNC13DQ70J99 1090 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 CCDC84Q86UT8 332 aaPredicted RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 EDEM3Q9BZQ6 932 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 STK17AQ9UEE5 414 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 CPP00450 1065 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 GNA11P29992 359 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 EMBQ6PCB8 327 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 ARHGAP27Q6ZUM4 889 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 EFCAB13Q8IY85 973 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 GUF1Q8N442 669 aaKnown RBP18.45■□□□□ 0.54
CTSB-228ENST00000533455 HDAC7Q8WUI4 952 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 PPM1EQ8WY54 764 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 BAP1Q92560 729 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 CAVIN3Q969G5 261 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 FAM107BQ9H098 131 aa18.45■□□□□ 0.54
CTSB-228ENST00000533455 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
CTSB-228ENST00000533455 NRAPQ86VF7 1730 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 OPA1O60313 960 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 LRRC63Q05C16 580 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
CTSB-228ENST00000533455 SLC4A8Q2Y0W8 1093 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 HAUS3Q68CZ6 603 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 SV2BQ7L1I2 683 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
CTSB-228ENST00000533455 DEF6Q9H4E7 631 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 SLC39A2Q9NP94 309 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 BLOC1S4Q9NUP1 217 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 AKR1B10O60218 316 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 SMARCA1P28370 1054 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 TECP42680 631 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 IRAK1P51617 712 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 GRB10Q13322 594 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 NNTQ13423 1086 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 DDB1Q16531 1140 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 ASTE1Q2TB18 679 aaPredicted RBP18.44■□□□□ 0.54
CTSB-228ENST00000533455 TTC31Q49AM3 519 aaPredicted RBP18.44■□□□□ 0.54
CTSB-228ENST00000533455 ALS2CLQ60I27 953 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 NFRKBQ6P4R8 1299 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 SH3RF3Q8TEJ3 882 aaPredicted RBP18.44■□□□□ 0.54
CTSB-228ENST00000533455 PLEKHA4Q9H4M7 779 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 STIM2Q9P246 746 aa18.44■□□□□ 0.54
CTSB-228ENST00000533455 SSU72P8A0A1W2PR75 194 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 SMCO2A6NFE2 343 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 LRRC53A6NM62 1247 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 CLSTN1O94985 981 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 RASA1P20936 1047 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 MAGEA1P43355 309 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 GLE1Q53GS7 698 aaKnown RBP18.43■□□□□ 0.54
CTSB-228ENST00000533455 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.43■□□□□ 0.54
CTSB-228ENST00000533455 HPS3Q969F9 1004 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 RRP36Q96EU6 259 aaKnown RBP18.43■□□□□ 0.54
CTSB-228ENST00000533455 FAM207AQ9NSI2 230 aaPredicted RBP18.43■□□□□ 0.54
CTSB-228ENST00000533455 TSKSQ9UJT2 592 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 SNED1Q8TER0 1413 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 ATAD5Q96QE3 1844 aa18.43■□□□□ 0.54
CTSB-228ENST00000533455 A0A0G2JS52 829 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 ESYT2A0FGR8 921 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 MYMKA6NI61 221 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.54
CTSB-228ENST00000533455 PPP4CP60510 307 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 CCDC181Q5TID7 509 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 LRRC55Q6ZSA7 311 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 RNF10Q8N5U6 811 aaKnown RBP18.42■□□□□ 0.54
CTSB-228ENST00000533455 PNMA5Q96PV4 448 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 GRIN2DO15399 1336 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 RBAK-RBAKDNI3L0D1 243 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 PAFAH1B1P43034 410 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 SKOR1P84550 965 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 RRAGAQ7L523 313 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms