RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ADD1P35611 737 aaKnown RBP23.61■■□□□ 1.37
CCS-208ENST00000533244 GJA9P57773 515 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 TNFAIP2Q03169 654 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 RNF180Q86T96 592 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 SMPD1P17405 629 aa23.6■■□□□ 1.37
CCS-208ENST00000533244 PDIA3P30101 505 aaKnown RBP23.6■■□□□ 1.37
CCS-208ENST00000533244 HOXA13P31271 388 aaPredicted RBP23.6■■□□□ 1.37
CCS-208ENST00000533244 CCSAPQ6IQ19 270 aaPredicted RBP23.6■■□□□ 1.37
CCS-208ENST00000533244 NAP1L2Q9ULW6 460 aaPredicted RBP23.6■■□□□ 1.37
CCS-208ENST00000533244 PHF24Q9UPV7 400 aa23.6■■□□□ 1.37
CCS-208ENST00000533244 PIK3CDO00329 1044 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 CTAGE5O15320 804 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 PDCD2LQ9BRP1 358 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 TSEN34Q9BSV6 310 aaKnown RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 ALDH8A1Q9H2A2 487 aaPredicted RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 Q9Y3F1 56 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 FRMPD4Q14CM0 1322 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 MYADML2A6NDP7 307 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 MEIS2O14770 477 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 EIF2AK2P19525 551 aaKnown RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 DUSP28Q4G0W2 176 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 TMEM63BQ5T3F8 832 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 PRPF38BQ5VTL8 546 aaKnown RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 ARHGEF16Q5VV41 709 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 DPF3Q92784 378 aa23.59■■□□□ 1.37
CCS-208ENST00000533244 ZNF274Q96GC6 653 aaPredicted RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 SENP6Q9GZR1 1112 aaPredicted RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 V9GY48 417 aaPredicted RBP23.59■■□□□ 1.37
CCS-208ENST00000533244 NR3C2P08235 984 aa23.58■■□□□ 1.36
CCS-208ENST00000533244 IRX5P78411 483 aaPredicted RBP23.58■■□□□ 1.36
CCS-208ENST00000533244 NTRK3Q16288 839 aa23.58■■□□□ 1.36
CCS-208ENST00000533244 WWC2Q6AWC2 1192 aa23.58■■□□□ 1.36
CCS-208ENST00000533244 WDR11Q9BZH6 1224 aa23.58■■□□□ 1.36
CCS-208ENST00000533244 CEP290O15078 2479 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 KIAA1217Q5T5P2 1943 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 hCG_1984214I3L0E3 225 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 MYCNP04198 464 aaPredicted RBP23.57■■□□□ 1.36
CCS-208ENST00000533244 STXBP2Q15833 593 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 LRRC26Q2I0M4 334 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 HEATR3Q7Z4Q2 680 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 TLK2Q86UE8 772 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 ZNF713Q8N859 430 aaPredicted RBP23.57■■□□□ 1.36
CCS-208ENST00000533244 SCFD2Q8WU76 684 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 GPKOWQ92917 476 aaPredicted RBP eCLIP23.57■■□□□ 1.366e-7■■□□□ 13.9
CCS-208ENST00000533244 SPC25Q9HBM1 224 aa23.57■■□□□ 1.36
CCS-208ENST00000533244 MOXD2PA6NHM9 499 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 C6orf222P0C671 652 aaPredicted RBP23.56■■□□□ 1.36
CCS-208ENST00000533244 PTGS1P23219 599 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 SNX17Q15036 470 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 PGM5Q15124 567 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 TYW1BQ6NUM6 668 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 PPP1R18Q6NYC8 613 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 FCHSD1Q86WN1 690 aa23.56■■□□□ 1.36
CCS-208ENST00000533244 DNAH12Q6ZR08 3092 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 EVI5O60447 810 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 EIF3JO75822 258 aaKnown RBP23.55■■□□□ 1.36
CCS-208ENST00000533244 IFNAR1P17181 557 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 ACLYP53396 1101 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 KCNA10Q16322 511 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 PFKFB3Q16875 520 aaPredicted RBP23.55■■□□□ 1.36
CCS-208ENST00000533244 CCDC62Q6P9F0 684 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 USP17L6PQ6QN14 398 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 TEX2Q8IWB9 1127 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 IL31RAQ8NI17 732 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 PSTPIP2Q9H939 334 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 BARHL2Q9NY43 387 aa23.55■■□□□ 1.36
CCS-208ENST00000533244 A0A1W2PQ45 241 aaPredicted RBP23.54■■□□□ 1.36
CCS-208ENST00000533244 A0A1W2PQY0 241 aa23.54■■□□□ 1.36
CCS-208ENST00000533244 STXBP3O00186 592 aa23.54■■□□□ 1.36
CCS-208ENST00000533244 NKRFO15226 690 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCS-208ENST00000533244 ARIH2O95376 493 aa23.54■■□□□ 1.36
CCS-208ENST00000533244 CCT2P78371 535 aaKnown RBP23.54■■□□□ 1.36
CCS-208ENST00000533244 C1orf53Q5VUE5 145 aa23.54■■□□□ 1.36
CCS-208ENST00000533244 NOL8Q76FK4 1167 aaKnown RBP23.54■■□□□ 1.36
CCS-208ENST00000533244 PCSK9Q8NBP7 692 aaKnown RBP23.54■■□□□ 1.36
CCS-208ENST00000533244 CUL5Q93034 780 aa23.54■■□□□ 1.36
CCS-208ENST00000533244 NCOA5Q9HCD5 579 aaKnown RBP23.54■■□□□ 1.36
CCS-208ENST00000533244 RBM27Q9P2N5 1060 aaKnown RBP23.54■■□□□ 1.36
CCS-208ENST00000533244 DYNC1LI2O43237 492 aaPredicted RBP23.53■■□□□ 1.36
CCS-208ENST00000533244 PRPF3O43395 683 aaKnown RBP23.53■■□□□ 1.36
CCS-208ENST00000533244 RGS20O76081 388 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 PKN1Q16512 942 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 SLC39A5Q6ZMH5 540 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 SMARCC2Q8TAQ2 1214 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 FERMT2Q96AC1 680 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 LARP6Q9BRS8 491 aaKnown RBP23.53■■□□□ 1.36
CCS-208ENST00000533244 RNF26Q9BY78 433 aaPredicted RBP23.53■■□□□ 1.36
CCS-208ENST00000533244 AP5M1Q9H0R1 490 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 NR2E3Q9Y5X4 410 aa23.53■■□□□ 1.36
CCS-208ENST00000533244 ASGR1P07306 291 aa23.52■■□□□ 1.36
CCS-208ENST00000533244 SCG2P13521 617 aa23.52■■□□□ 1.36
CCS-208ENST00000533244 TTLL4Q14679 1199 aa23.52■■□□□ 1.36
CCS-208ENST00000533244 FSCN1Q16658 493 aaKnown RBP23.52■■□□□ 1.36
CCS-208ENST00000533244 GNASQ5JWF2 1037 aa23.52■■□□□ 1.36
CCS-208ENST00000533244 H0YGN5 161 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 TXNP10599 105 aaKnown RBP23.51■■□□□ 1.35
CCS-208ENST00000533244 CCND2P30279 289 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 ATN1P54259 1190 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms