RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 BMP15O95972 392 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 CYP3A7P24462 503 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 MAPK4P31152 587 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 CIITAP33076 1130 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 CRHR2Q13324 411 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 SLC30A10Q6XR72 485 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 ANKRD35Q8N283 1001 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 TAAR1Q96RJ0 339 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 PORCNQ9H237 461 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 CPA4Q9UI42 421 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 MGAMO43451 1857 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 DNAJC25-GNG10A0A024R161 153 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 FCER1AP12319 257 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 PTPAQ15257 358 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
HIF3A-215ENST00000533145 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-215ENST00000533145 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-215ENST00000533145 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 CHAMP1Q96JM3 812 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 MBOAT7Q96N66 472 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 R3HDMLQ9H3Y0 253 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 CNPY2Q9Y2B0 182 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 PCDHB6Q9Y5E3 794 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 PLXNA1Q9UIW2 1896 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
HIF3A-215ENST00000533145 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 ELP1O95163 1332 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 WNT7AO00755 349 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 GCFC2P16383 781 aaKnown RBP16.04■□□□□ 0.16
HIF3A-215ENST00000533145 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
HIF3A-215ENST00000533145 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 XRRA1Q6P2D8 792 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 RMDN3Q96TC7 470 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 MMP19Q99542 508 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 PXMP2Q9NR77 195 aa16.04■□□□□ 0.16
HIF3A-215ENST00000533145 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 PPP6R2O75170 966 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 PTPREP23469 700 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 KCTD2Q14681 263 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 PCNX4Q63HM2 1172 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 PLEKHH3Q7Z736 793 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 CCAR1Q8IX12 1150 aaKnown RBP16.03■□□□□ 0.16
HIF3A-215ENST00000533145 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
HIF3A-215ENST00000533145 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-215ENST00000533145 IWS1Q96ST2 819 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
HIF3A-215ENST00000533145 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
HIF3A-215ENST00000533145 SLC15A5A6NIM6 579 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 LAD1O00515 517 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.16
HIF3A-215ENST00000533145 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
HIF3A-215ENST00000533145 ATP2B1P20020 1258 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 MCM4P33991 863 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 GRB14Q14449 540 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 NBR1Q14596 966 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 PGM5Q15124 567 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 ZNF174Q15697 407 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 Q4G0T1 1027 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 ARHGEF16Q5VV41 709 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 KCNG4Q8TDN1 519 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 RNF186Q9NXI6 227 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 ADD3Q9UEY8 706 aaKnown RBP16.02■□□□□ 0.16
HIF3A-215ENST00000533145 DIS3Q9Y2L1 958 aaKnown RBP16.02■□□□□ 0.16
HIF3A-215ENST00000533145 IVNS1ABPQ9Y6Y0 642 aa16.02■□□□□ 0.16
HIF3A-215ENST00000533145 SOWAHBA6NEL2 793 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 SPTLC2O15270 562 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 STAM2O75886 525 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 NR3C2P08235 984 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 MCM7P33993 719 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-215ENST00000533145 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
HIF3A-215ENST00000533145 STK38Q15208 465 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
HIF3A-215ENST00000533145 SAGE1Q9NXZ1 904 aa16.01■□□□□ 0.15
HIF3A-215ENST00000533145 B4DLN1 442 aa16■□□□□ 0.15
HIF3A-215ENST00000533145 MEIS1O00470 390 aa16■□□□□ 0.15
HIF3A-215ENST00000533145 FIBPO43427 364 aa16■□□□□ 0.15
HIF3A-215ENST00000533145 EDNRBP24530 442 aa16■□□□□ 0.15
HIF3A-215ENST00000533145 PRPHP41219 470 aa16■□□□□ 0.15
HIF3A-215ENST00000533145 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms