RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 SPC24Q8NBT2 197 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 MED10Q9BTT4 135 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 TMEM206Q9H813 350 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 DNM1Q05193 864 aaKnown RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 EHD4Q9H223 541 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 STIM2Q9P246 746 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 MSCO60682 206 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 ARID5AQ03989 594 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 MAP3K20Q9NYL2 800 aaKnown RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 CYP21A2P08686 494 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 CAP2P40123 477 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 GABPB2Q8TAK5 448 aaPredicted RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 GCOM2Q9BZD3 368 aaPredicted RBP12.87□□□□□ -0.35
CSRP1-215ENST00000532313 STK17AQ9UEE5 414 aa12.87□□□□□ -0.35
CSRP1-215ENST00000532313 TMCO5BA8MYB1 307 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 MAFGO15525 162 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 TECP42680 631 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 CDCA5Q96FF9 252 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
CSRP1-215ENST00000532313 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 SALL1Q9NSC2 1324 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 SNAP23O00161 211 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 STRNO43815 780 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 FKTNO75072 461 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 C6orf222P0C671 652 aaPredicted RBP12.86□□□□□ -0.35
CSRP1-215ENST00000532313 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
CSRP1-215ENST00000532313 CPA1P15085 419 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 SYCE3A1L190 88 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 ERLIN1O75477 346 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
CSRP1-215ENST00000532313 CD19P15391 556 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
CSRP1-215ENST00000532313 KIF11P52732 1056 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 BIRC2Q13490 618 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSRP1-215ENST00000532313 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
CSRP1-215ENST00000532313 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 AKR1B1P15121 316 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 NFX1Q12986 1120 aaKnown RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 UVSSAQ2YD98 709 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 SND1Q7KZF4 910 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 TBCKQ8TEA7 893 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 DPF3Q92784 378 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 TSNARE1Q96NA8 513 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 ACCSQ96QU6 501 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 SORBS3O60504 671 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 TNNC1P63316 161 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 PPP2R3AQ06190 1150 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 MYO1EQ12965 1108 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 C15orf52Q6ZUT6 534 aaKnown RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 CYP2D6P10635 497 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 BFSP2Q13515 415 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 TRIM14Q14142 442 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 MTERF2Q49AM1 385 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 FAM49AQ9H0Q0 323 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 ZNF302Q9NR11 478 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 AAASQ9NRG9 546 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 NKRFO15226 690 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 MYL1P05976 194 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 BACE1P56817 501 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 UBASH3AP57075 661 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 IER5Q5VY09 327 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 DACT1Q9NYF0 836 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
CSRP1-215ENST00000532313 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
CSRP1-215ENST00000532313 SLIT2O94813 1529 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms