RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PYM1Q9BRP8 204 aaKnown RBP16.5■□□□□ 0.23
NXF1-213ENST00000532297 DISC1Q9NRI5 854 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 RMND1Q9NWS8 449 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 CLGNO14967 610 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 ORC4O43929 436 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 TRAPPC10P48553 1259 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
NXF1-213ENST00000532297 FAM98CQ17RN3 349 aaKnown RBP16.49■□□□□ 0.23
NXF1-213ENST00000532297 TGFBRAP1Q8WUH2 860 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 RUBCNQ92622 972 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 PSMB7Q99436 277 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 STIM2Q9P246 746 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 PCDHA6Q9UN73 950 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 PCDHA8Q9Y5H6 950 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 LSP1P33241 339 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
NXF1-213ENST00000532297 GUCY1A3Q02108 690 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 NAA35Q5VZE5 725 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 CCDC170Q8IYT3 715 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 ZKSCAN4Q969J2 545 aaPredicted RBP16.49■□□□□ 0.23
NXF1-213ENST00000532297 RNPC3Q96LT9 517 aaKnown RBP16.49■□□□□ 0.23
NXF1-213ENST00000532297 SMARCAL1Q9NZC9 954 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 MAD2L2Q9UI95 211 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 RREB1Q92766 1687 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 CHUKO15111 745 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 FCER1AP12319 257 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 CXCR5P32302 372 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
NXF1-213ENST00000532297 TRIM58Q8NG06 486 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 EPN3Q9H201 632 aa16.49■□□□□ 0.23
NXF1-213ENST00000532297 MYH1P12882 1939 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 PDS5AQ29RF7 1337 aaKnown RBP16.48■□□□□ 0.23
NXF1-213ENST00000532297 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
NXF1-213ENST00000532297 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 VAV2P52735 878 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 NFIXQ14938 502 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 CCDC181Q5TID7 509 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 CAVIN3Q969G5 261 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
NXF1-213ENST00000532297 CAPN6Q9Y6Q1 641 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 KLRC4O43908 158 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 TACC1O75410 805 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
NXF1-213ENST00000532297 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
NXF1-213ENST00000532297 DNM2P50570 870 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 ITIH3Q06033 890 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 CLEC10AQ8IUN9 316 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 PCMTD1Q96MG8 357 aaPredicted RBP16.48■□□□□ 0.23
NXF1-213ENST00000532297 TSGA10Q9BZW7 698 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 PCDHA4Q9UN74 947 aa16.48■□□□□ 0.23
NXF1-213ENST00000532297 COL5A3P25940 1745 aaPredicted RBP16.47■□□□□ 0.23
NXF1-213ENST00000532297 NEDD9Q14511 834 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 SPA17Q15506 151 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 ZNF473Q8WTR7 871 aaKnown RBP16.47■□□□□ 0.23
NXF1-213ENST00000532297 OSBPL9Q96SU4 736 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 MKNK2Q9HBH9 465 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 KLC4Q9NSK0 619 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 EHD2Q9NZN4 543 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 CCDC88AQ3V6T2 1871 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 PLCG1P19174 1290 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 APBA1Q02410 837 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 LETM2Q2VYF4 491 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 KDM7AQ6ZMT4 941 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
NXF1-213ENST00000532297 ZNF572Q7Z3I7 529 aaPredicted RBP16.47■□□□□ 0.23
NXF1-213ENST00000532297 YTHDF3Q7Z739 585 aaKnown RBP16.47■□□□□ 0.23
NXF1-213ENST00000532297 ADSSL1Q8N142 457 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 CENPHQ9H3R5 247 aa16.47■□□□□ 0.23
NXF1-213ENST00000532297 MOCS3O95396 460 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 DTHD1Q6ZMT9 781 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 GJA10Q969M2 543 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 CCDC42Q96M95 316 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 TACO1Q9BSH4 297 aaKnown RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 MLXIPQ9HAP2 919 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 EXOC1Q9NV70 894 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 ZNF263O14978 683 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 GNPATO15228 680 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 SRGNP10124 158 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 SEC24CP53992 1094 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 ZBED6P86452 979 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 CCDC40Q4G0X9 1142 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms